DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stam and AT4G32760

DIOPT Version :9

Sequence 1:NP_477448.1 Gene:Stam / 34505 FlyBaseID:FBgn0027363 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_001190892.1 Gene:AT4G32760 / 829412 AraportID:AT4G32760 Length:676 Species:Arabidopsis thaliana


Alignment Length:763 Identity:179/763 - (23%)
Similarity:274/763 - (35%) Gaps:234/763 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DADVEKATSETNTNDNWSLILDVCDKVTTNPRLAKDCLKAVMRRMGHTDPHVVMQAITLLDALSN 75
            :|.||:||||.....:|::.|::||.:.::|..|||.:|.:.:|:|..:|...:.|:|||:.:..
plant     3 NAMVERATSEMLIGPDWAMNLEICDMLNSDPAQAKDVVKGIKKRIGSRNPKAQLLALTLLETIVK 67

  Fly    76 NCGKPLHLEVASRDFETEFRRLLAKAQP--KVSLKMRQVLKNWAENDYKNDRELDLIPALYAKLR 138
            |||..:|:.||.:....|..|:: |.:|  .|..|:..::..|.| .:...|.  ..|..||   
plant    68 NCGDMVHMHVAEKGVIHEMVRIV-KKKPDFHVKEKILVLIDTWQE-AFGGPRA--RYPQYYA--- 125

  Fly   139 QEGYDFKNLGDKTSKTVAEKAAALPKDPNVVSSQQEEDDIAKAIELSLKENKGSPKTGSVASTGT 203
              ||          :.:....|..|:                      :..:.:| ..:...|..
plant   126 --GY----------QELLRAGAVFPQ----------------------RSERSAP-VFTPPQTQP 155

  Fly   204 ASAYPSLYPSF--AGTGSSAPSAEASSAPAPEPRKVRALYDFEAAEENELTFFAGEIIHVLDDSD 266
            .::||   |:.  ||.|:..|.      |:.||       :|.....:|:               
plant   156 LTSYP---PNLRNAGPGNDVPE------PSAEP-------EFPTLSLSEI--------------- 189

  Fly   267 PNWWKGYNQRGEGLFPSNFVTADLSVDPERLDINQQHKSAAAAGQRELDSAAALQQKTEAAAAAA 331
                    |..:|:                :|:..:..||...|.:|     .|:|:       .
plant   190 --------QNAKGI----------------MDVLAEMLSALEPGNKE-----DLKQE-------V 218

  Fly   332 AAQPVEIDESKIDRLLHLLHEANPEDPSQDSDEMLQLEQEVHQMGPLIDAELERVDRKHAQL--- 393
            ....||...:...|::||::..        |||.|..:      |..::.:|:||...:..:   
plant   219 MVDLVEQCRTYKQRVVHLVNST--------SDESLLCQ------GLALNDDLQRVLTNYEAIASG 269

  Fly   394 ------------TQLSSDLVDAINLYHTLMRDDRAAAGHFAAAAGGFMPGLAGFPGAALYGAPGY 446
                        ::....|||..............|.|..:::..|.:..||         .|..
plant   270 LPGTSSQIEKPKSETGKSLVDVDGPLIDTGDSSNQANGATSSSGNGVLNQLA---------LPAP 325

  Fly   447 PAAGGFPPAQ----NYPGMHSMPYGPVPNPP-------------------TSAPSQAPGAPGGYL 488
            |...|...::    :...:..:|.|| |.|.                   |:.||.|. ||.   
plant   326 PVTNGSANSKIDLLSGDDLALVPVGP-PQPASPVASDQNALALIDMFSDNTNNPSPAT-APS--- 385

  Fly   489 GQPQGQVPLPYQNGHAAQMNSL--PAHLTQPTGTAP------MPQPIYTQ--PTPVTTQQQQQPL 543
            |.|...:||..| || .|.||.  .|.|.|..|.||      ..||.|.|  .:|.::|..|||:
plant   386 GNPAQNIPLNPQ-GH-QQPNSQAGEAGLQQSNGFAPQVGYSQFEQPSYGQGVSSPWSSQPAQQPV 448

  Fly   544 -------------PQHPQQ-------PPQQQGQ--QPPQHP-QNSY-HIDP---QSQYAQVPPAV 581
                         |..|.:       |..:.|.  .|..|| |.:: |..|   .:.|.|:|   
plant   449 QPSYEGAQDSTAFPPPPWEAQLQDYSPSAESGSPFSPGMHPTQTAFTHAQPVNNNNPYPQIP--- 510

  Fly   582 TQIQQPQQPPAPHAYMSPQHQQA-----PPPQGYQPGPNLYGPNGSPAVVNPQSYMSPQQQQQQH 641
             |...|....:|:|.| ||..||     |.||..|.|  :|.|| .|.......| .|||||||.
plant   511 -QTGPPVNNNSPYAQM-PQTGQAVANISPYPQIPQNG--VYMPN-QPNQALGSGY-QPQQQQQQQ 569

  Fly   642 PPPHDQFSQLHQ-QMAAMSMAGGPPVGAPGYHMQNDAVKNNIPIYQQQ 688
            ......::|..| |......|.|..:|..||. .|...:.:.|...||
plant   570 MMMAQYYAQQQQLQQQQQQQAYGNQMGGYGYG-YNQQQQGSSPYLDQQ 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StamNP_477448.1 VHS_STAM 10..154 CDD:239625 43/144 (30%)
SH3_STAM 235..288 CDD:212754 4/52 (8%)
GAT 340..412 CDD:281166 14/86 (16%)
AT4G32760NP_001190892.1 VHS 2..132 CDD:340765 43/147 (29%)
GAT_GGA-like_plant 188..266 CDD:410579 23/142 (16%)
PRK10263 <352..>541 CDD:236669 57/199 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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