DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stam and AT3G08790

DIOPT Version :10

Sequence 1:NP_477448.1 Gene:Stam / 34505 FlyBaseID:FBgn0027363 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_187491.1 Gene:AT3G08790 / 820026 AraportID:AT3G08790 Length:607 Species:Arabidopsis thaliana


Alignment Length:719 Identity:136/719 - (18%)
Similarity:235/719 - (32%) Gaps:240/719 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VEKATSETNTNDNWSLILDVCDKVTTNPRLAKDCLKAVMRRMGHTDPHVVMQAITLLDALSNNCG 78
            |::|||:.....:|::.|::||.:...|...::.:..:.:|:......|.:.|:|||:.:..|||
plant     6 VDRATSDMLIGPDWAMNLEICDMLNHEPGQTREVVSGIKKRLTSRTSKVQLLALTLLETIITNCG 70

  Fly    79 KPLHLEVASRDFETEFRRLLAKAQPKVSLKMR--QVLKNWAENDYKNDRELDLIPALYAKLRQEG 141
            :.:|::||.:|...:..: :||.:|.:.:|.:  .::..|.|:............|.|.:|.:.|
plant    71 ELIHMQVAEKDILHKMVK-MAKRKPNIQVKEKILILIDTWQESFSGPQGRHPQYYAAYQELLRAG 134

  Fly   142 YDFKNLGDKTSKTVAEKAAALPKDPNVVSSQQEEDDIAKAIELSLKENKGSPKTGSVASTGTASA 206
            ..|                  |:.|.:..|..:.....:     ..:|..:.:..:: .|.|.|.
plant   135 IVF------------------PQRPQITPSSGQNGPSTR-----YPQNSRNARQEAI-DTSTESE 175

  Fly   207 YPSLYPSFAGTGSSAPSAEASSAPAPEPRKVRALYDFEAAEENELTFFAGEIIHVLDDSDPNWWK 271
            :|:|                   ...|.:..|.:.|..|           |:::.:|.::....|
plant   176 FPTL-------------------SLTEIQNARGIMDVLA-----------EMMNAIDGNNKEGLK 210

  Fly   272 ------------GYNQRGEGLFPSNFVTADLSVDPERLDINQ-------QHKSAAAAGQRELDSA 317
                        .|.||...|..|   |:|.|:..:.|.:|.       :|::.|:.     :|.
plant   211 QEVVVDLVSQCRTYKQRVVHLVNS---TSDESMLCQGLALNDDLQRLLAKHEAIASG-----NSM 267

  Fly   318 AALQQKTEAAAAAAAAQPVEIDES---------------KIDRL-------------LHLLHEAN 354
            ...::|::........|.:::..|               |||.|             |.|:    
plant   268 IKKEEKSKKEVPKDTTQIIDVGSSETKNGSVVAYTTNGPKIDLLSGDDFETPNADNSLALV---- 328

  Fly   355 PEDPSQDSDEMLQLEQEVHQMGPLIDAELER---VDRKHAQLTQLSSDLVDAINLYHTLMRDDRA 416
            |..|.|.|..:.:.:..:..:..|.|...|.   ....||...::..:.                
plant   329 PLGPPQPSSPVAKPDNSIVLIDMLSDNNCESSTPTSNPHANHQKVQQNY---------------- 377

  Fly   417 AAGHFAAAAGGFMPGLAGFPGAALYGAPGYPAAGGFPPAQNY--------PGMHSMPYGPVPNPP 473
                    :.||.||         :....|...|...|..|.        |...:.|:.|..:||
plant   378 --------SNGFGPG---------HQEQSYYGQGSSAPVWNLQITQQPSSPAYGNQPFSPNFSPP 425

  Fly   474 TSAPSQAPGAPGGYLGQPQGQVPLPYQNGHAAQMNSLPAHLTQPTGTAPMPQPIYTQPTPVT--- 535
            .|                      |:..|....:.:||....:....:..||...|.|..||   
plant   426 AS----------------------PHYGGQNNNVLALPPPPWEAQSPSSSPQYSPTHPMQVTQVV 468

  Fly   536 -TQQQQQPLPQHPQQPPQQQGQQPPQHPQNSYHIDPQSQYAQVPPAVTQIQQPQQPPAPHAYMSP 599
             |....|||..:|      ||..|  |..|:.:.:....:.              ||....:|  
plant   469 ITTHTHQPLGYNP------QGGSP--HATNNNNNNMFGMFL--------------PPMTGGHM-- 509

  Fly   600 QHQQAPPPQGYQP-------GPNLYGPNGSPAVVNPQSYMSPQQ-----------------QQQQ 640
                 |||.|:..       .||:||..|..| ..||.|:..||                 |...
plant   510 -----PPPFGHNGHVTNNNYNPNMYGGYGGQA-QPPQQYLVEQQMYGMSLQDNGNNNTNPYQVSS 568

  Fly   641 HPPP 644
            |.||
plant   569 HQPP 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StamNP_477448.1 VHS_STAM 10..141 CDD:340770 31/128 (24%)
SH3_STAM 235..288 CDD:212754 11/64 (17%)
GAT_STAM 337..413 CDD:410593 16/106 (15%)
PHA03247 <436..526 CDD:223021 15/97 (15%)
AT3G08790NP_187491.1 VHS 5..132 CDD:340765 31/126 (25%)
GAT_GGA-like_plant 183..261 CDD:410579 18/91 (20%)

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