Protein Alignment Stam and gga1

DIOPT Version :9

• Sequence 1: NP_477448.1
• Gene: Stam / 34505
• FlyBaseID: FBgn0027363
• Length: 689
• Species: Drosophila melanogaster
• Sequence 2: NP_001004000.2
• Gene: gga1 / 798361
• ZFINID: ZDB-GENE-040822-13
• Length: 635
• Species: Danio rerio
• Alignment Length: 721
• Identity: 131/721 - (18%)
• Similarity: 237/721 - (32%)
• Gaps: 219/721 - (30%)

  Fly    11 DADVEKATSETNTNDNWSLILDVCDKVTTNPRLAKDCLKAVMRRMGHTDPHVVMQAITLLDALSN 75
            ::.:.|||:..|...:|..|...||:::..|...:...:.:..::........:||:.:|:....
Zfish    11 ESRINKATNPLNRETDWESIQLFCDQLSNEPEGPQLATRLLAHKIQSPQEWEAIQALMVLETCVK 75

  Fly    76 NCGKPLHLEVASRDFETEFRRLL------AKAQPKVSLKMRQVLKNWAENDYKNDRELDLIPALY 134
            ||||..|.||....|..|..:::      ::|...|..|:.:::.:|
Zfish    76 NCGKRFHNEVGKFRFLNELIKVVSPKYLGSRAPEPVKKKVLEMMYSW------------------ 122

  Fly   135 AKLRQEGYDFKNLGDKTSKTVAEKAAALPKDPNVVSSQQEEDDIAKAIELSLKENKGSPKTGSVA 199
                                    ..:||          ||..|:.|.::..|:
Zfish   123 ------------------------TVSLP----------EETKISDAYQMLKKQ----------- 142

  Fly   200 STGTASAYPSLYPSFAGTGSSAPSAEASSAPAPEPRKVRALYDFEAAEENELTFFAGEIIHVLDD 264
              |.....|.|             .:....|.|.||...|:  ||..|::::      :..:|:.
Zfish   143 --GIIKQDPDL-------------PDDKPCPPPPPRPKNAI--FEDEEKSKM------LSRLLNS 184

  Fly   265 SDPNWWKGYNQRGEGLFPSNFVTADLSVDPERLDINQQHKSAAAAGQRELDSAAALQQKTEAAAA 329
            |.|          |.|..:|.:..::        :.:..|......:|    ..|:|
Zfish   185 SHP----------EDLRAANKLIKEM--------VQEDQKRMEKVSKR----VNAIQ-------- 219

  Fly   330 AAAAQPVEIDESKIDRLLHLLHEANPEDPSQDSDEMLQ-LEQEVHQMGPL---IDAELERVDRKH 390
                   |:.|| :..|..||.:.:.:..||.::|::: |.|...:|.|.   :.::.|..|...
Zfish   220 -------EVKES-VGLLTQLLGDYSKDSSSQSNEELIKDLYQRCEKMRPTLFRLASDTEDNDEAL 276

  Fly   391 AQLTQLSSDLVDAINLYHTLMRDDRAAAGHFAAAAGGFMPGLAGFPGAA-----LYGAPGYPAAG 450
            |::.|.:..|...||||..|:|.:.         ..|.....|..||::     |.|....|:|.
Zfish   277 AEILQANDSLTQVINLYRQLVRGEE---------VNGEASSSATHPGSSNALLDLTGLDTSPSAQ 332

  Fly   451 GFP--PAQNY--------PGMHSMPYGPVPNPPTSAPSQAPGAPGGYLGQPQGQVPLPYQNGHAA 505
            .|.  |:|..        ..:.|:....|.:..||:                       |:|.|.
Zfish   333 SFSEFPSQTQELGISLLDDELMSLGLTEVNSNLTSS-----------------------QSGDAM 374

  Fly   506 QMNSLPAHLTQPTGTAPMPQ---PIYTQ-----PTPVTTQQQ------------QQPLPQHPQQP 550
            ..|:..:..|:.|...|.|.   |:.:.     |.|||:.:.            ||.||....|.
Zfish   375 GWNTFQSSETEDTPVMPEPAVLLPVTSATKTPVPVPVTSTKSLDELDLLGKTLLQQSLPPEGLQV 439

  Fly   551 PQQQGQQPPQHPQNSYHIDPQSQYAQVP-PAVTQIQQPQQPPAPHAYMSPQH-----QQAPPPQG 609
            ...:.|...:.......|...:..|..| |.::...:|..  ..::.::||.     :...|.:.
Zfish   440 KWDKLQSQSKPTLRDLQIKSGNNAATSPSPVLSFSSEPGS--LLNSQLTPQDDVSLVKVTVPLES 502

  Fly   610 YQPGPNLYGPNGSPAVVNPQSYMSPQQQQQQHPPPHDQFSQLHQQMAAMSMAGGPPVGAPGYHMQ 674
            .:|...|      |..:..:..:.......:.|||    ::....:..:||....|:.......|
Zfish   503 IKPSSML------PVTIFDKHSLRVLFHFAKDPPP----ARPDVLVVIISMLSSAPLPITNVRFQ 557

  Fly   675 NDAVKN 680
            ....||
Zfish   558 AAVPKN 563

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Stam	NP_477448.1	VHS_STAM	10..154	CDD:239625	25/148 (17%)
		SH3_STAM	235..288	CDD:212754	11/52 (21%)
		GAT	340..412	CDD:281166	22/75 (29%)
gga1	NP_001004000.2	VHS_GGA	9..147	CDD:239624	33/200 (17%)
		GAT_GGA1_GGA2	210..298	CDD:260097	26/107 (24%)
		Alpha_adaptinC2	513..627	CDD:197886	9/55 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170574153
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.840