DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stam and Tom1l1

DIOPT Version :10

Sequence 1:NP_477448.1 Gene:Stam / 34505 FlyBaseID:FBgn0027363 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_001344472.1 Gene:Tom1l1 / 71943 MGIID:1919193 Length:474 Species:Mus musculus


Alignment Length:621 Identity:130/621 - (20%)
Similarity:202/621 - (32%) Gaps:229/621 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FGQS--SPFDADV----EKATSETNTNDNWSLILDVCDKVTTNPRLAKDCLKAVMRRMGHTDPHV 62
            ||:|  .|:...|    ||||......::|...|.:||.:.|.....||.:||:.:|:.....|.
Mouse     3 FGKSHRDPYATSVGHLIEKATFAGVLTEDWGQFLHICDIINTTQDGPKDAVKALKKRISKNYNHK 67

  Fly    63 VMQ-AITLLDALSNNCGKPLHLEVASRDFETEFRRLLAKAQPKVSL------KMRQVLKNWAEND 120
            .:| :::|:|....|||......:..::|..:  .|:....|:.:|      ::...:|.|::. 
Mouse    68 EIQLSLSLIDMCVQNCGPSFQSLIVKKEFIKD--TLVKLLNPRYTLPLETQNRILNFIKTWSQG- 129

  Fly   121 YKNDRELDLIPALYAKLRQEGYDFKNLGDKTSKTVAEKAAALPKDPNVVSSQQEEDDIAKAIELS 185
            :....::..:..:|..|.::|..|.. .|...:|..|.....|..|..|.:       |.|:...
Mouse   130 FPGGVDVSEVKEVYLDLLKKGVQFPP-SDGEPETRQEAGQISPNRPTSVPT-------APALSSI 186

  Fly   186 LKENKGSPKTGSVASTGTASAYPSLYPSFAGTGSS-----------APSAEASSAPAPEPRK--- 236
            :     :||..::          ||.|...|...|           ..:....:.|..|..:   
Mouse   187 I-----APKNPTI----------SLVPEQIGKLHSELDMVKMNVKVMTAILMENTPGSENHEDIE 236

  Fly   237 -VRALY-----------DFEAAEENE-LTFFAGEIIHVLDDSDPNWWKGYNQRGEGLFPSNFVTA 288
             :|.||           |.....||| :|.   |:|.|.:|.: |...||               
Mouse   237 LLRKLYKTGREMQERIMDLLVVVENEDVTM---ELIQVNEDLN-NAVLGY--------------- 282

  Fly   289 DLSVDPERLDINQQHKSAAAAGQRELDSAAALQQK---TEAAAAAAAAQPVEIDESKIDRLLHLL 350
                  ||...|||.               .|:||   |||...::                   
Mouse   283 ------ERFTRNQQR---------------LLEQKRNRTEATRTSS------------------- 307

  Fly   351 HEANPEDPSQDSDEMLQLEQEVHQMGPLIDAELERVDRKHAQLTQLS-SDLVDAI--NLYHTL-- 410
                  :||..|.::|.|...|    |:.......::..:|||:.|| |.|...|  |||.:|  
Mouse   308 ------EPSAPSCDLLDLSPIV----PVPTPNEGALNSVNAQLSGLSVSSLSPVITNNLYPSLQP 362

  Fly   411 MRDDRAAAGHFAAAAGGFMPGLAGFPGAALYGAPGYPAAGGFP--PAQNYPGMHSMPYGPVPNPP 473
            .||       ..|:....:|.|                   ||  .:||....|:          
Mouse   363 QRD-------LLASEDIEIPTL-------------------FPQRTSQNLASSHT---------- 391

  Fly   474 TSAPSQAPGAPGGYLGQPQGQVPLPYQNGHAAQMNSLPAHLTQPTGTAPMPQPIYTQPTPVTTQQ 538
                                     |.|.|:   ||:   |.||..       ::|........|
Mouse   392 -------------------------YDNFHS---NSV---LLQPVS-------LHTATAAAAANQ 418

  Fly   539 QQQPLPQHPQQPPQQQGQ-QPPQHPQNSYHI---DP 570
            :..|||.  ..|..:.|. |||    |.|.:   ||
Mouse   419 RLPPLPS--SHPVLKDGDLQPP----NYYEVMEFDP 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StamNP_477448.1 VHS_STAM 10..141 CDD:340770 30/141 (21%)
SH3_STAM 235..288 CDD:212754 15/68 (22%)
GAT_STAM 337..413 CDD:410593 19/80 (24%)
PHA03247 <436..526 CDD:223021 13/91 (14%)
Tom1l1NP_001344472.1 VHS_Tom1L1 14..150 CDD:340794 30/138 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 153..180 7/34 (21%)
GAT_TM1L1 198..289 CDD:410584 22/115 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 291..317 9/65 (14%)
Interaction with GRB2 392..395 1/2 (50%)
SH3-binding 420..424 1/3 (33%)
Interaction with PIK3R1 441..444 1/2 (50%)
SH2-binding 457..460
Blue background indicates that the domain is not in the aligned region.

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