Protein Alignment Stam and Tom1

DIOPT Version :9

• Sequence 1: NP_477448.1
• Gene: Stam / 34505
• FlyBaseID: FBgn0027363
• Length: 689
• Species: Drosophila melanogaster
• Sequence 2: NP_001008366.1
• Gene: Tom1 / 361370
• RGDID: 1308024
• Length: 492
• Species: Rattus norvegicus
• Alignment Length: 588
• Identity: 122/588 - (20%)
• Similarity: 221/588 - (37%)
• Gaps: 161/588 - (27%)

  Fly     7 SSPFDADVEKATSETNTNDNWSLILDVCDKVTTNPRLAKDCLKAVMRR-MGHTDPHVVMQAITLL 70
            |||....:||||..:..:::|:|.:::||.:.......||..:||.:| :|:.:.|.||.|:|:|
  Rat    10 SSPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDAFRAVKKRIVGNKNFHEVMLALTVL 74

  Fly    71 DALSNNCGKPLHLEVASRDF--ETEFRRLLAKAQPK--VSLKMRQVLKNWAENDYKNDRELDLIP 131
            :....|||...|:.|||:||  ....|.:|.|..|.  |..|:..::::||: .:::..:|..:.
  Rat    75 ETCVKNCGHRFHVLVASQDFVENVLVRTILPKNNPPTIVHDKVLNLIQSWAD-AFRSSPDLTGVV 138

  Fly   132 ALYAKLRQEGYDFKNLG-DKTS------KTVAEKAAALPKDPNVVSSQQEEDDIAKAIELSLKEN 189
            |:|..||::|.:|.... |..|      :||........::| |||:
  Rat   139 AVYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETPSRQNP-VVSN------------------ 184

  Fly   190 KGSPKTGSVASTGTASAYPSLYPSFAGTGSSAPSAEASSAPAPEPRKVRALYDFEAAEENELTFF 254
              |...|.::...|....|::.|             ..|...|.|.::..|       .:||...
  Rat   185 --SSHRGDLSQHATPLPTPAVLP-------------GDSPITPTPEQIGKL-------RSELEMV 227

  Fly   255 AGEIIHVLDDSDPNWWKGYNQRGEGLFPSNFVTADLSVDPERLDINQQHKSAAAAGQRELDSAAA 319
            .|.:            :..::....|.|:....|||.:..|   :|:              :..|
  Rat   228 NGNV------------RVMSEMLTELVPTQVEPADLELLQE---LNR--------------TCRA 263

  Fly   320 LQQKTEAAAAAAAAQPVEIDESKIDRLLHLLHEANPEDPSQDSDEMLQLEQEVHQMGPLIDAELE 384
            :||                      |:|.|:...:.|   |.::|:|.:...::.    :....|
  Rat   264 MQQ----------------------RILELIPRISNE---QLTEELLMINDNLNN----VFLRHE 299

  Fly   385 RVDR-------KHAQLTQLSSDLVDAINLYHTLMRDDRAAAGHFAAAAGGFMPGLAGFPGAALYG 442
            |.:|       |.:...:|::||:|        |..|.||..:.::...|...|    ......|
  Rat   300 RFERFRTGQTAKASGEAELAADLID--------MGPDPAATSNLSSQLAGVDLG----SSRVRAG 352

  Fly   443 APGYPAAGGFPPAQNYPGMHSMPYG-PVPNPPTSAPSQAPGAPGGYLG------QPQGQVPLPYQ 500
            .....|:|..   ::...|.::..| .:.:.......:||....|..|      |..|.:|..
  Rat   353 LQSLEASGHL---EDDFDMFALTRGSSLADQRKGVKYEAPQTTDGLAGALDARQQSTGAIPAT-- 412

  Fly   501 NGHAAQMNSLPAHLTQPTGTAPMPQPIYTQPTPVTTQQQQQPLPQHPQ--------QPPQQQGQQ 557
              .|..|..:...|:...|::.      .:|:.||:::..:.|.:..:        ..|..:|
  Rat   413 --QARIMEDIEQWLSTDVGSSA------EEPSGVTSEEFDKFLEERAKAADRLPNLASPSAEG-- 467

  Fly   558 PPQ 560
            ||:
  Rat   468 PPR 470

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Stam	NP_477448.1	VHS_STAM	10..154	CDD:239625	46/155 (30%)
		SH3_STAM	235..288	CDD:212754	6/52 (12%)
		GAT	340..412	CDD:281166	15/78 (19%)
Tom1	NP_001008366.1	VHS_Tom1	12..152	CDD:239623	44/140 (31%)
		GAT_TOM1	214..308	CDD:260094	25/158 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166334907
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840