Protein Alignment Stam and Gga

DIOPT Version :9

• Sequence 1: NP_477448.1
• Gene: Stam / 34505
• FlyBaseID: FBgn0027363
• Length: 689
• Species: Drosophila melanogaster
• Sequence 2: NP_572571.1
• Gene: Gga / 31902
• FlyBaseID: FBgn0030141
• Length: 660
• Species: Drosophila melanogaster
• Alignment Length: 732
• Identity: 137/732 - (18%)
• Similarity: 224/732 - (30%)
• Gaps: 235/732 - (32%)

  Fly    14 VEKATSETNTNDNWSLILDVCDKVTTNPRLAKDCLKAVMRRMGHTDPHVVMQAITLLDALSNNCG 78
            :|:||:.....|...:.: .|..|.:|.:|.....:.::.::..|:.....:||:||:.....||
  Fly    12 LERATNPAQKIDELGVQM-FCIVVKSNAQLVHKAQEMIVAKVRSTNVTEATRAISLLEECMTQCG 75

  Fly    79 KPLHLEVASRDFETEFRRLLAK----AQPKVSLKMR--QVLKNWAENDYKNDRELDLIPALYAKL 137
            .....|.:...|..|..||::|    |:....:|.|  :.|..|.....:..:..|    .|..|
  Fly    76 DDFQDEASKFRFLNELIRLVSKKYKGAETPHEVKQRIMECLLLWTTEFPQRQKIRD----AYDML 136

  Fly   138 RQEGYDFKNLGDKTSKTVAEKA-----------AALPKDPN------------------------ 167
            |:|| |.::  ..|...||::.           |.|.|..|
  Fly   137 RKEG-DIEH--GTTEAAVAKRESVLGTIDEAMFAKLIKSNNPENFKRANLLLQYRMAQEARRNDL 198

  Fly   168 ------VVSSQQE---------------EDDIAKAI-EL--SLKENK------------------ 190
                  |:...||               ..|:::.: ||  |.|::|
  Fly   199 LAQHRLVLCEVQETMQLLNQMLDTYDPANQDVSETLHELYKSCKKHKPIFQHLPQLLDDSDAQLV 263

  Fly   191 GSPKTGSVASTGTASAYPSLYPS-----FAGTGSSAPSAEASSAPAPEPRKVRALYDFEAAEENE 250
            ......:.|...|...|..|.||     .|...:|||:. |||..:.............|...||
  Fly   264 ADTLDANCALLATMQRYKLLVPSPTRSTAAALTTSAPTV-ASSVKSTASSTTATTSSNNAQLLNE 327

  Fly   251 LTFFAGEIIHVLDDSDPNWWKGYNQRGEGLFPSNFVTADLSVDPERLDINQQHKSAAAAGQRELD 315
            |   .|:::  :|        |.|:..        .||..|:           .:|||:|...|
  Fly   328 L---LGDLL--ID--------GSNKAA--------TTATTSL-----------PNAAASGSNPL- 359

  Fly   316 SAAALQQKTEAAAAAAAAQPVEIDESKIDRLLHLLHEANPEDPSQDSDEMLQLEQEVHQMGPLID 380
              |.|.....:|.|.:.|:                   ....|.|::..:  ||.:|...|...:
  Fly   360 --ADLSDIFSSALAESEAK-------------------QQSQPFQNATTL--LEPQVISQGTTTE 401

  Fly   381 A----------ELERVDRKHAQLTQLSSDLVDAINLYHTLMRDDRAAAGHFAAAAGGFMPGLAGF 435
            |          ::....||..|:..||.:|...|     |...||             ||.....
  Fly   402 ALANGNGGSASKVPETIRKMPQIDMLSEELFQQI-----LPTQDR-------------MPSFKRD 448

  Fly   436 PGAALYG----------APGYPAAGGFPPAQNYPG-------MHSMPYGPVPNPPTSAPSQAPGA 483
            |......          ||..|.....|.:.:.|.       :.|:...|:.:.......:|..|
  Fly   449 PEKITLNDLARERMHIKAPEEPTTANDPASDSAPAIATATATVDSIDDVPLLSDDVEKKDEAVVA 513

  Fly   484 PGGYL--GQPQGQVPLPYQNGHAAQMNSLPAHLTQPTGTAPMPQPIYTQPTPVTTQQQQQPLPQH 546
            |...:  .:|..::.:...|             .|.||                  :|:..|...
  Fly   514 PVTVVPPAKPLSEINVELDN-------------IQATG------------------EQRIVLDDD 547

  Fly   547 PQQPPQQQGQQPPQHPQNSYHIDPQSQYAQVPPAVTQIQQPQQPPAPHAYMSPQHQQAPPPQGYQ 611
            ..|.........|.|..:...|..|::..| |....|.:...:.|.....::|...|.||.:.::
  Fly   548 DMQLSLNFTSDRPGHRVSVIVISAQNKSRQ-PVRDFQFEASVKKPCKVRLLTPTDSQMPPHKPFR 611

  Fly   612 PGPNLYGPNGSPAVVNP 628
            |...:   |....::||
  Fly   612 PATPI---NQVMLLLNP 625

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Stam	NP_477448.1	VHS_STAM	10..154	CDD:239625	34/145 (23%)
		SH3_STAM	235..288	CDD:212754	8/52 (15%)
		GAT	340..412	CDD:281166	15/81 (19%)
Gga	NP_572571.1	VHS_GGA	7..144	CDD:239624	33/137 (24%)
		GAT	210..284	CDD:281166	11/73 (15%)
		Alpha_adaptinC2	543..644	CDD:197886	18/87 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45438666
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840