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Protein Alignment Stam and Wdfy1
DIOPT Version :9
Sequence 1: | NP_477448.1 |
Gene: | Stam / 34505 |
FlyBaseID: | FBgn0027363 |
Length: | 689 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001380913.1 |
Gene: | Wdfy1 / 301549 |
RGDID: | 1305996 |
Length: | 410 |
Species: | Rattus norvegicus |
Alignment Length: | 130 |
Identity: | 26/130 - (20%) |
Similarity: | 53/130 - (40%) |
Gaps: | 44/130 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 131 PALYAKLRQEGYDFKNLGDKTSKTVAEKAAALPKDPNVVSSQQEEDDIAKAIELSLKENKGSPKT 195
|.|.:|: ||: :.....|..:||:..|:::.:: :.|.:.||.:.|
Rat 14 PVLLSKI--EGH----------QDAVTAALLIPKEDGVITASED-----RTIRVWLKRDSG---- 57
Fly 196 GSVASTGTASAYPSLYPSFAGTGSSAPSAEASSAPAPEPRKV------RALYDFEAAEE-NELTF 253
..:||:|.:.| |..::.|...:.|:| .|:.:|..:|: |::.|
Rat 58 ---------QYWPSIYHTMA-------SPCSAMAYHHDSRRVFVGQDNGAVMEFHVSEDFNKMNF 106
Fly 254 253
Rat 107 106
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Stam | NP_477448.1 |
VHS_STAM |
10..154 |
CDD:239625 |
5/22 (23%) |
SH3_STAM |
235..288 |
CDD:212754 |
7/26 (27%) |
GAT |
340..412 |
CDD:281166 |
|
Wdfy1 | NP_001380913.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166334910 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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