Protein Alignment Stam and Gga1

DIOPT Version :9

• Sequence 1: NP_477448.1
• Gene: Stam / 34505
• FlyBaseID: FBgn0027363
• Length: 689
• Species: Drosophila melanogaster
• Sequence 2: XP_008763901.1
• Gene: Gga1 / 300066
• RGDID: 1307770
• Length: 635
• Species: Rattus norvegicus
• Alignment Length: 698
• Identity: 141/698 - (20%)
• Similarity: 221/698 - (31%)
• Gaps: 258/698 - (36%)

  Fly    11 DADVEKATSETNTNDNWSLILDVCDKVTTN---PRLAKDCLKAVMRRMGHTDPHVVMQAITLLDA 72
            :|.:.:||:..|...:|:.|...|:::..:   |.||   .:.:..::........:||:|:|:.
  Rat    11 EARINRATNPLNKELDWASINGFCEQLNEDFEGPPLA---TRLLAHKIQSPQEWEAIQALTVLET 72

  Fly    73 LSNNCGKPLHLEVASRDFETEFRRLLAKAQPKVSLKMRQVLKNWAENDYKNDRELDLIPALYAKL 137
            ...:|||..|.||....|..|   |:....||.
  Rat    73 CMKSCGKRFHDEVGKFRFLNE---LIKVVSPKY-------------------------------- 102

  Fly   138 RQEGYDFKNLGDKTSKTVAEK--------AAALPKDPNVVSSQQEEDDIAKAIELSLKEN--KGS 192
                     ||.:||:.|..|        ...||          ||..||:|.::..|:.  |..
  Rat   103 ---------LGSRTSEKVKNKILELLYSWTVGLP----------EEVKIAEAYQMLKKQGIVKSD 148

  Fly   193 PKTGSVASTGTASAYPSLYPSFAGTGSSAPSAEASSAPAPEPRKVRALYDFEAAEENELTFFAGE 257
            ||....|          ::|                .|.|.|:.|    .||..|::::
  Rat   149 PKLPEDA----------IFP----------------LPPPRPKNV----IFEDEEKSKM------ 177

  Fly   258 IIHVLDDSDPNWWKGYNQRGEGLFPSNFVTADL-SVDPERLDINQQHKSAAAAGQRELDSAAALQ 321
            :..:|..|.|          |.|..:|.:..:: ..|.:|::...:..:|.    .|:::...|.
  Rat   178 LARLLKSSHP----------EDLRAANKLIKEMVQEDQKRMEKISKRVNAI----EEVNNNVKLL 228

  Fly   322 QKTEAAAAAAAAQPVEIDESKIDRLLHLLHEANPEDPSQDSDEMLQLEQEVHQMGPL---IDAEL 383
            .:...:.:..||.                        |...|.|.:|.|...:|.|.   :.::.
  Rat   229 TEMVMSHSQGAAS------------------------SSSEDLMKELYQRCERMRPTLFRLASDT 269

  Fly   384 ERVDRKHAQLTQLSSDLVDAINLYHTLMRDDRAAAGHFAAAAGGFMPGLAGFPGAALYGAPG--- 445
            |..|...|::.|.:.:|...||||..|:|.:...    ..|..|.:||..    :||....|
  Rat   270 EDNDEALAEILQANDNLTQVINLYKQLVRGEELN----GEATAGSIPGST----SALLDLSGLDL 326

  Fly   446 ------YPAAGGFPPAQNYPGMHS----------MPYG-PVPNPPTSAPSQAPGAPGGYLGQPQG 493
                  |||....|..||.|...|          |..| ..|.||::..|.:.|..|
  Rat   327 PSSGTTYPATPTRPGNQNSPEQLSASVSLLDDELMSLGLSDPTPPSAPSSDSVGWNG-------- 383

  Fly   494 QVPLPYQNGHAAQMNSLPAHLTQPTGTAPMPQPIYTQPTPVTTQQQQQPLPQHPQQPPQQQGQQP 558
                 :|:.               .||.|...|                    |.|.|....:.|
  Rat   384 -----FQSS---------------DGTEPSVPP--------------------PAQAPCMDSRPP 408

  Fly   559 PQ-HPQNSYHIDPQSQYAQ------VPPAVTQIQQPQQPPAPHAYM--------SPQ-------H 601
            .| .|..|..:|......:      :||...|::..:|.|||...:        ||.       |
  Rat   409 AQASPPTSSGLDDLDLLGKTLMQQALPPEAQQVRWEKQQPAPRLTLRDLQSKSSSPNPGATSLLH 473

  Fly   602 QQAPPPQGYQPG--------PNLYGPNGSPAVVNPQSYMSPQQQQQQH 641
            ..:|.|.|.||.        .|:..|..|   :.|.|.: |.....||
  Rat   474 TTSPEPPGPQPQAIPTELSLTNITVPLES---IKPSSIL-PVTVYDQH 517

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Stam	NP_477448.1	VHS_STAM	10..154	CDD:239625	29/145 (20%)
		SH3_STAM	235..288	CDD:212754	10/52 (19%)
		GAT	340..412	CDD:281166	17/74 (23%)
Gga1	XP_008763901.1	VHS_GGA	9..147	CDD:239624	39/192 (20%)
		DUF327	<180..234	CDD:294489	11/67 (16%)
		GAT_GGA1_GGA2	210..298	CDD:260097	22/115 (19%)
		Alpha_adaptinC2	513..627	CDD:197886	2/5 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166334913
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840