DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Stam and GGA2

DIOPT Version :10

Sequence 1:NP_477448.1 Gene:Stam / 34505 FlyBaseID:FBgn0027363 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_055859.1 Gene:GGA2 / 23062 HGNCID:16064 Length:613 Species:Homo sapiens


Alignment Length:744 Identity:126/744 - (16%)
Similarity:227/744 - (30%) Gaps:243/744 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GQSSPFDADVEKATSETNTNDNWSLILDVCDKVTTNPRLAKDCLKAVMRRMGHTDPHVVMQAITL 69
            |.::..:..:.|||..:.:..:||.|.:.|::|.|:|.........:..::........:.|:|:
Human    21 GPAASLELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALTV 85

  Fly    70 LDALSNNCGKPLHLEVASRDFETEFRRLLAK------AQPKVSLKMRQVLKNWA---ENDYKNDR 125
            |:...|:||:..|.|||...|..|..::|:.      |..||..::.::|.:|.   ..|.|   
Human    86 LEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPEDIK--- 147

  Fly   126 ELDLIPALYAKLRQEGYDFKNLGDKTSKTVAEKAAALPKDPNVVSSQQEEDDIAKAIELSLKENK 190
                |...|..|:::|                   .:.:||.:                      
Human   148 ----IRDAYQMLKKQG-------------------IIKQDPKL---------------------- 167

  Fly   191 GSPKTGSVASTGTASAYPSLYPSFAGTGSSAPSAEASSAPAPEPRKVRALYDFEAAEENELTFFA 255
                                           |..:....|:|.|:.  :::|.:..:...||   
Human   168 -------------------------------PVDKILPPPSPWPKS--SIFDADEEKSKLLT--- 196

  Fly   256 GEIIHVLDDSDPNWWKGYNQRGEGLFPSNFVTADLSVDPERLDINQQHKSAAAAGQRELDSAAAL 320
                .:|..:.|          |.|..:|.:..:|        :.::                  
Human   197 ----RLLKSNHP----------EDLQAANRLIKNL--------VKEE------------------ 221

  Fly   321 QQKTE-AAAAAAAAQPVEIDESKIDRLLHLLHEANPEDPSQDSDEMLQLEQEVHQMGPLIDAELE 384
            |:|:| .:...:|.:.|......:..:|.:........|.|::                :....|
Human   222 QEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPGQAPPDQEA----------------LQVVYE 270

  Fly   385 RVDRKHAQLTQLSSDLVD-----------------AINLYHTLMRDDRAAAGHFAAAAGGFMPGL 432
            |.::....|.:|:||..|                 .:.||..:| :.|...|:...::.|.:|..
Human   271 RCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVM-EGRVTFGNRVTSSLGDIPVS 334

  Fly   433 AGF--PGAALYGAP--------GYPAAGGFPPAQNYPGMHSMPYGPVP---------------NP 472
            ..|  |...:...|        |....|...|:..:..:.::.....|               ||
Human   335 RVFQNPAGCMKTCPLIDLEVDNGPAQMGTVVPSLLHQDLAALGISDAPVTGMVSGQNCCEEKRNP 399

  Fly   473 PTSAPSQAPGAPGGYLGQPQGQ---------VPLPYQNGHAAQMNSLPAHLTQPTGTAPMP---- 524
            .:|.      .|||.:..|...         .|.|....:.:| .|:|..:  |.||...|    
Human   400 SSST------LPGGGVQNPSADRNLLDLLSAQPAPCPLNYVSQ-KSVPKEV--PPGTKSSPGWSW 455

  Fly   525 --QPIYTQPTPVTTQQQQQPLPQHPQQPPQQQGQQPP--QHPQNSYHIDPQSQYAQVP--PAVTQ 583
              .|:...|:...|...|..:|....:|    ...||  .:.:|.:.|.........|  |.|..
Human   456 EAGPLAPSPSSQNTPLAQVFVPLESVKP----SSLPPLIVYDRNGFRILLHFSQTGAPGHPEVQV 516

  Fly   584 IQQPQQPPAPHAYMSPQHQQAPPPQ---GYQPGPN----LYGPNGSPAVVNPQSYMSPQQQQQQH 641
            :.......||........|.|.|..   ..||..:    .:.|...|||::....:.        
Human   517 LLLTMMSTAPQPVWDIMFQVAVPKSMRVKLQPASSSKLPAFSPLMPPAVISQMLLLD-------- 573

  Fly   642 PPPHDQFSQLHQQMAAMSMAGGPPVGAPG 670
             .||.:..:|..::....  ||.|....|
Human   574 -NPHKEPIRLRYKLTFNQ--GGQPFSEVG 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StamNP_477448.1 VHS_STAM 10..141 CDD:340770 33/139 (24%)
SH3_STAM 235..288 CDD:212754 8/52 (15%)
GAT_STAM 337..413 CDD:410593 13/92 (14%)
PHA03247 <436..526 CDD:223021 22/127 (17%)
GGA2NP_055859.1 VHS_GGA2 25..163 CDD:340807 34/163 (21%)
GGA_N-GAT 185..224 CDD:465702 10/81 (12%)
GAT_GGA1_GGA2 227..314 CDD:410586 14/102 (14%)
Unstructured hinge 316..483 32/175 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..414 7/30 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 435..466 9/33 (27%)
Alpha_adaptinC2 491..605 CDD:197886 23/120 (19%)

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