DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stam and TOM1L2

DIOPT Version :10

Sequence 1:NP_477448.1 Gene:Stam / 34505 FlyBaseID:FBgn0027363 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_001337261.1 Gene:TOM1L2 / 146691 HGNCID:11984 Length:536 Species:Homo sapiens


Alignment Length:358 Identity:80/358 - (22%)
Similarity:152/358 - (42%) Gaps:81/358 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSPFDADVEKATSETNTNDNWSLILDVCDKVTTNPRLAKDCLKAVMRRM-GHTDPHVVMQAITLL 70
            |:|....:||||..:..:::|:|.:::||.:.......||.::|:.:|: |:.:...||.|:|:|
Human    10 STPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVL 74

  Fly    71 DALSNNCGKPLHLEVASRDFETEFRRLLAK-AQPK------VSLKMRQVLKNWAENDYKNDRELD 128
            :....|||...|:.||:|||   ...:|.| ..||      |..|:..:::.||: .:::..:|.
Human    75 ETCVKNCGHRFHILVANRDF---IDSVLVKIISPKNNPPTIVQDKVLALIQAWAD-AFRSSPDLT 135

  Fly   129 LIPALYAKLRQEGYDFKNLGDKTSKTVAEKAAALPKDPNVVSSQQEEDDIAKAIELSLKENKGSP 193
            .:..:|.:|:::|.:|         .:|:..|..|    :.:.|:...::..|..:...:::...
Human   136 GVVHIYEELKRKGVEF---------PMADLDALSP----IHTPQRSVPEVDPAATMPRSQSQQRT 187

  Fly   194 KTGSVASTGTASAYPSLYPSFAGTGSSAPSAEASSAPAPEPRKVRALYDFEAAEENELTFFAGEI 258
            ..||.:|..     |:.|        |||.|.|.|...|    :.|..:..|...:||....|..
Human   188 SAGSYSSPP-----PAPY--------SAPQAPALSVTGP----ITANSEQIARLRSELDVVRGNT 235

  Fly   259 IHVLDDSDPNWWKGYNQRGEGLFPSNFVTADLSVDPERLDINQQHKSAAAAGQR--ELDSAAALQ 321
                        |..::....:.|....::||.:      :.:.:::..|..||  ||.|..:.:
Human   236 ------------KVMSEMLTEMVPGQEDSSDLEL------LQELNRTCRAMQQRIVELISRVSNE 282

  Fly   322 QKTEAAAAAAAAQPVEIDESKIDRLLHLLHEAN 354
            :.||                   .|||:..:.|
Human   283 EVTE-------------------ELLHVNDDLN 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StamNP_477448.1 VHS_STAM 10..141 CDD:340770 38/138 (28%)
SH3_STAM 235..288 CDD:212754 7/52 (13%)
GAT_STAM 337..413 CDD:410593 4/18 (22%)
PHA03247 <436..526 CDD:223021
TOM1L2NP_001337261.1 VHS_Tom1L2 12..148 CDD:340793 39/139 (28%)
GAT_TM1L2 218..309 CDD:410585 20/116 (17%)
Blue background indicates that the domain is not in the aligned region.

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