DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-3 and ASHR2

DIOPT Version :10

Sequence 1:NP_609464.1 Gene:SmydA-3 / 34502 FlyBaseID:FBgn0262599 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_849991.1 Gene:ASHR2 / 816483 AraportID:AT2G19640 Length:398 Species:Arabidopsis thaliana


Alignment Length:308 Identity:69/308 - (22%)
Similarity:109/308 - (35%) Gaps:82/308 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GRYLVAKGAIRGHGLLIEELPF-----------AVGPKCNGPVVCLGCYEPNPDPEEELCSECGW 74
            ||.|||..::|...:::.|.|.           :|.|.|:      .|:........:.|..|. 
plant    22 GRSLVAAQSLRAGQVILRESPLLLYSAFPFLSSSVSPYCD------HCFRLLASSAHQKCQSCS- 79

  Fly    75 PLCVECAQQADNAHFRLECSQL-----------------KDARARF----FRLPSGSRHCPQLDC 118
             |...|:.....:|....|..|                 :..:|||    :.|.:.|....|:  
plant    80 -LVSFCSPNCFASHTPWLCESLRRLHQSSSSAFSDQPSDRQVQARFLLSAYNLAAASPSDFQI-- 141

  Fly   119 IMPLRVLLAKEANP--ERWDNEVAPMEHH-----------KEERQRDADVWHADRVNIAQYLRGP 170
            ::.|:...:...:|  ...|:..|...|.           .......|.:...|:|| |..|..|
plant   142 LLSLQGSGSSNGDPSCSAGDSAAAGFLHSLLSSVCPSLPVSISPDLTAALLSKDKVN-AFGLMEP 205

  Fly   171 CQLANRFSEELIMQVVGVLEVNAFEARSPKGYPLRCLFPYTGILAHNCVPNTSRSIY---PSEG- 231
            |.::|                   |.||.:.|.   ::|.|....|:|:||..|..|   .|:| 
plant   206 CSVSN-------------------EKRSVRAYG---IYPKTSFFNHDCLPNACRFDYVDSASDGN 248

  Fly   232 YKIRLRAMVDLEEGQPLHHSYTYTLDGTAQRQKHLKQGKFFTCQCERC 279
            ..|.:|.:.|:.||:.:..||.......:.|||.|.:...|.|.|:||
plant   249 TDIIIRMIHDVPEGREVCLSYFPVNMNYSSRQKRLLEDYGFKCDCDRC 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-3NP_609464.1 SET_SMYD <192..279 CDD:380997 28/90 (31%)
ASHR2NP_849991.1 SET_SMYD <198..296 CDD:380997 34/120 (28%)

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