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Protein Alignment SmydA-3 and Smyd3

DIOPT Version :9

Sequence 1:	NP_001260366.1	Gene:	SmydA-3 / 34502	FlyBaseID:	FBgn0262599	Length:	507	Species:	Drosophila melanogaster
Sequence 2:	NP_081464.1	Gene:	Smyd3 / 69726	MGIID:	1916976	Length:	428	Species:	Mus musculus

Alignment Length:	501	Identity:	112/501 - (22%)
Similarity:	174/501 - (34%)	Gaps:	147/501 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly    21 GRYLVAKGAIRGHGLLIEELPFAVGPKCNGP--VVCLGCYEPNPDPEEEL--CSECG-WPLC-VE 79
            |..|.|...:|...||....|.|. ..|.|.  |||..|..    .:|:|  ||:|. ...| .:
Mouse    15 GNGLRAVAPLRPGELLFRSDPLAY-TVCKGSRGVVCDRCLL----GKEKLMRCSQCRIAKYCSAK 74

  Fly    80 CAQQADNAHFRLECSQLKDARARFFRLPSGSRHCPQLDCIMPLRVLLAKEANPER------WDNE 138
            |.::|...| |.|||.||..:.|:   |..|   .:|...:.::::..|.:..|:      .::.
Mouse    75 CQKKAWPDH-RRECSCLKSCKPRY---PPDS---VRLLGRVIVKLMDEKPSESEKLYSFYDLESN 132

  Fly   139 VAPMEHHKEE--RQRDADVWHADRVNI--AQYLRGPCQLANRFSEELI---------MQVVGVLE 190
            ::.:...|:|  ||......|..|..|  |..|.....|...|::.:.         ||.|||
Mouse   133 ISKLTEDKKEGLRQLAMTFQHFMREEIQDASQLPPSFDLFEAFAKVICNSFTICNAEMQEVGV-- 195

  Fly   191 VNAFEARSPKGYPLRCLFPYTGILAHNCVPNTSRSIYPSEGYKIRLRAMVDLEEGQPLHHSYTYT 255
                           .|:|...:|.|:|.||.|   ....|..:.|||:.::|.|:.|...|...
Mouse   196 ---------------GLYPSMSLLNHSCDPNCS---IVFNGPHLLLRAVREIEAGEELTICYLDM 242

  Fly   256 LDGTAQRQKHLKQGKFFTCQCERCLDPTELGTHFSSLKCGQCAEGFQVPRQPTEPDTSWNCANCG 320
            |..:.:|:|.|:....|.|.|.||                          |..:.|
Mouse   243 LMTSEERRKQLRDQYCFECDCIRC--------------------------QTQDKD--------- 272

  Fly   321 SDTSNADALAMLQSLQSEVNAVQALPMAAKRLEEIERLLRKYKSLLHPLHFIATGLRQLLIEMYG 385
                 ||.|...:.:..||..      :.|::||: :...|::.:|        .|.|.:|....
Mouse   273 -----ADMLTGDEQIWKEVQE------SLKKIEEL-KAHWKWEQVL--------ALCQAIINSNS 317

  Fly   386 RVQGYEMVQLPD-------------------HQLERKAELCRQVLRVLNTFEPGLSRTRAMNL-- 429
            .       :|||                   ..||.......:.:.....|.||....|.:.:
Mouse   318 N-------RLPDINIYQLKVLDCAMDACINLGMLEEALFYAMRTMEPYRIFFPGSHPVRGVQVMK 375

  Fly   430 ---YELHVPLVLLA----KSGFIAGKLKGGELRARLVDAIDLLKEC 468
               .:||..:...|    :..|...|:..|...:.:.|.|.||:||
Mouse   376 VGKLQLHQGMFPQAMKNLRLAFDIMKVTHGREHSLIEDLILLLEEC 421

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.