DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-3 and SMYD2

DIOPT Version :9

Sequence 1:NP_001260366.1 Gene:SmydA-3 / 34502 FlyBaseID:FBgn0262599 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_064582.2 Gene:SMYD2 / 56950 HGNCID:20982 Length:433 Species:Homo sapiens


Alignment Length:284 Identity:68/284 - (23%)
Similarity:112/284 - (39%) Gaps:68/284 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RGHGLLIEELPFAVGP---KCNGPVV------------CLGCYEPNPDPEEELCSECGWPLC--- 77
            :|.||...: ||.||.   .|  |..            |..|:     ..:|..|:||  .|   
Human    17 KGRGLRALQ-PFQVGDLLFSC--PAYAYVLTVNERGNHCEYCF-----TRKEGLSKCG--RCKQA 71

  Fly    78 ----VECAQQADNAHFRLECSQLKDARARFFRLPSGSRHCPQLDCIMPLRVLLAKEANPERWDNE 138
                ||| |:.|....:||||.:         :..|....|.....:..|:|..::.:|||..:|
Human    72 FYCNVEC-QKEDWPMHKLECSPM---------VVFGENWNPSETVRLTARILAKQKIHPERTPSE 126

  Fly   139 ----VAPMEHHKEERQRD-ADVWHADRVNI----AQYLRGPCQLANRFSEELIMQVVGVLEVNAF 194
                |...|.|.::...: .|:..:|...:    :::|..|       ..:.::.:...:..|.|
Human   127 KLLAVKEFESHLDKLDNEKKDLIQSDIAALHHFYSKHLGFP-------DNDSLVVLFAQVNCNGF 184

  Fly   195 ----EARSPKGYPLRCLFPYTGILAHNCVPNTSRSIYPSEGYKIRLRAMVDLEEGQPLHHSYTYT 255
                |..|..|   ..:||...::.|:|.||.   |...:|....:||:.:::.|:.:..||...
Human   185 TIEDEELSHLG---SAIFPDVALMNHSCCPNV---IVTYKGTLAEVRAVQEIKPGEEVFTSYIDL 243

  Fly   256 LDGTAQRQKHLKQGKFFTCQCERC 279
            |..|..|...|:...||||:|:.|
Human   244 LYPTEDRNDRLRDSYFFTCECQEC 267

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
SmydA-3NP_001260366.1 SET <207..252 CDD:250181 11/44 (25%)
SMYD2NP_064582.2 SET_SMYD2 7..269 CDD:380979 68/284 (24%)
S-adenosyl-L-methionine binding 17..19 0/1 (0%)
zf-MYND 52..90 CDD:396356 13/45 (29%)
Peptide substrate binding 183..185 0/1 (0%)