DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-3 and LOC4578080

DIOPT Version :10

Sequence 1:NP_609464.1 Gene:SmydA-3 / 34502 FlyBaseID:FBgn0262599 Length:507 Species:Drosophila melanogaster
Sequence 2:XP_061515696.1 Gene:LOC4578080 / 4578080 VectorBaseID:AGAMI1_012181 Length:378 Species:Anopheles gambiae


Alignment Length:160 Identity:36/160 - (22%)
Similarity:61/160 - (38%) Gaps:33/160 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NRTAVQWSPVCGRYLVAKGAIRGHGLLIEELPF--AVGPKCNGPVVCLGCYEPNP---DPEEELC 69
            |...:|.:...|||:|....::...:::.:.||  .:...|. .|.|..|:...|   .|    |
Mosquito   219 NCLQLQQNEQYGRYVVTTRRLKVGDVVMLDTPFVKTLQENCR-YVRCDFCHAERPFTLIP----C 278

  Fly    70 SECGWPL-C-VECAQQADNAHFRLECSQLKDARARFFRLPSGSRHCPQLDCIMPLRVLLAKEANP 132
            ..|.|.: | .||..:|.:.:.|.||..::||.:...|.|:              ..|.|.....
Mosquito   279 EGCTWVMYCSQECLSKAFDQYHRYECGVMRDAYSICGRFPA--------------TALRATATAI 329

  Fly   133 ERWDNEVAPMEHHKEERQRDADVWHADRVN 162
            ..:|.::..:::|       .|.....|||
Mosquito   330 SIFDGDLVALQNH-------LDALDESRVN 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-3NP_609464.1 SET_SMYD <192..279 CDD:380997
LOC4578080XP_061515696.1 None
Blue background indicates that the domain is not in the aligned region.

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