DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-3 and smyd5

DIOPT Version :9

Sequence 1:NP_001260366.1 Gene:SmydA-3 / 34502 FlyBaseID:FBgn0262599 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_001004614.2 Gene:smyd5 / 447875 ZFINID:ZDB-GENE-040912-39 Length:415 Species:Danio rerio


Alignment Length:366 Identity:75/366 - (20%)
Similarity:126/366 - (34%) Gaps:121/366 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TLSVNRTAVQ----WSPV-----CGRYLVAKGAIRGHGLLIEELPFAVGPKCNGPVVCLGCYEPN 61
            |:.:.|..|.    |:.:     |...|.|......:...:..||..:.|.   |.:|    :..
Zfish    46 TIFIERPLVSSQFLWNALYKYRACEYCLRALETAEENARRLSGLPALILPH---PELC----KVR 103

  Fly    62 PDPEEELCSECGWPLC-VECAQQADNAHFRLEC------------SQLKDARARFFRLPSGSRHC 113
            || ..:.|.:|....| .||.|.|.:.:.::.|            ::|:|| .|....|      
Zfish   104 PD-RHQACPQCQVMYCSSECRQAAMDQYHKILCLGPSNDDPDHPVNKLQDA-WRSVHFP------ 160

  Fly   114 PQLDCIMPLRVLLA---KEANPERWD----NEVAPMEHHKEE-----------------RQRDAD 154
            |:...:|.|..::|   :..:.|||.    |..:...:.:||                 |.....
Zfish   161 PETSSVMILAKMVATIKQTQDKERWQRLFTNFCSRTANEEEEIVHKLLGEKFQGQLGLLRNLFTT 225

  Fly   155 VWHADRV--------------------------NIAQYLRGPC---QLANRFSEELIMQVVGVLE 190
            ..:.||:                          :::|::.. |   :|..:..|:|         
Zfish   226 ALYEDRLSQWFTPEGFRSLFSLVGTNGQGIGTSSLSQWVHA-CDALELPRQQREQL--------- 280

  Fly   191 VNAF------EARSPKGYPLRC----LFPYTGILAHNCVPNTSRSIYPSEGYKIRLRAMVDLEEG 245
             :||      :.....|..|.|    ||.......|:||||...| :|...:.:.|.|:.|:..|
Zfish   281 -DAFIDQLYKDIDKETGDFLNCEGSGLFLLQSSCNHSCVPNAEAS-FPENNFLLHLTALGDIGPG 343

  Fly   246 QPLHHSYTYTLD------GTAQRQKHLKQGKFFTCQCERCL 280
            :.:..||   ||      ....|.|.|::...|.|.|::||
Zfish   344 EEICISY---LDCCQRDRSRHSRHKILRENYLFICSCQKCL 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-3NP_001260366.1 SET <207..252 CDD:250181 13/44 (30%)
smyd5NP_001004614.2 zf-MYND 100..135 CDD:280009 10/39 (26%)
SET <293..350 CDD:214614 16/57 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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