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Protein Alignment SmydA-3 and Smyd4

DIOPT Version :9

Sequence 1:	NP_001260366.1	Gene:	SmydA-3 / 34502	FlyBaseID:	FBgn0262599	Length:	507	Species:	Drosophila melanogaster
Sequence 2:	NP_001096081.1	Gene:	Smyd4 / 319822	MGIID:	2442796	Length:	799	Species:	Mus musculus

Alignment Length:	590	Identity:	120/590 - (20%)
Similarity:	194/590 - (32%)	Gaps:	186/590 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly    18 PVCGRYLVAKGAIRGHGLLIEELPF------AVGPK---C----------NGPVVCLGCYEPN-- 61
            |:.||:|||...|....||::|..|      ...|:   |          :|.:.|..|.:..
Mouse   241 PLKGRHLVATKDILPGELLVKEDAFVSVLIPGEMPRPHHCLENKWDTRVTSGDLYCHRCLKHTLA 305

  Fly    62 --PDPEEELCSECGW-PLC-VECAQQADNAHFRLECS----------------------QLKDA- 99
              |      |..|.: ..| .||.|||.:.:...|||                      :.:|.
Mouse   306 TVP------CGSCSYAKYCSQECMQQAWDLYHSTECSLGGLLLTLGVFCHVALRMTLLARFEDVD 364

  Fly   100 -----------------------------------------------------------RARFFR 105
                                                                       .|.|..
Mouse   365 RVVRMLCDEVGSTDTCLPESKNLVKAFDYTSQGESEEKSKIGEPPIPGCNVNGKYGSNYNAIFSL 429

  Fly   106 LPSGSRHCPQLDCIMPLRV-LLAKEANPERWDNEVAPMEHHKEERQ---RDADVWHADRVN---- 162
            ||...:|.|:...|..:.| .|.::...:....:.......|....   .|..||.|..:.
Mouse   430 LPHTEKHSPEHRFICAISVSALCRQLKADSVQAQTLKSPKLKAVTPGLCADLTVWGAAMLRHMLQ 494

  Fly   163 ---IAQYLRGPCQLANRFSEELIMQVVGVLEVNAFEARSPKGYPLRCLFPYTGILAHNCVPNTSR 224
               .||.:...|...:  :|.:|        .|:.:.|...|     :||...:|.|:|.||||.
Mouse   495 LQCNAQAITSICHTGS--NESII--------TNSRQIRLATG-----IFPVVSLLNHSCRPNTSV 544

  Fly   225 SIYPSEGYKIRLRAMVDLEEGQPLHHSY--TYTLDGTAQRQKHLKQGKFFTCQCERCLDPTELGT 287
            |.   .|....:||...:.:||.:.|.|  ..:..|.|:||:.|....||.|:|..|
Mouse   545 SF---TGTVATVRAAQRIAKGQEILHCYGPHESRMGVAERQQRLSSQYFFDCRCGAC-------- 598

  Fly   288 HFSSLK-----------CGQCAEGFQVPRQPTEPDTSWNCAN--CGSDTSNADALAMLQSLQSEV 339
            |..:|:           |..|       |...:.:...:|:|  |.:..|....::.||.||.:|
Mouse   599 HAETLRAAAAPRWEAFCCKTC-------RALMQGNDVLSCSNESCTNSVSRDQLVSRLQDLQQQV 656

  Fly   340 NAVQALPMAAKRLEEIERLLR------KYKSLLHP-LHFIATGLRQLLIEMYGRVQGYEMVQLPD 397
            ...|.|....|..:.|::|||      .:.|..|. |..|..||.|....:...::....||...
Mouse   657 CMAQKLLRTGKPEQAIQQLLRCREAAESFLSAEHTVLGEIEDGLAQAHATLGNWLKSAAHVQKSL 721

  Fly   398 HQLERK-----AELCRQVLRVLNTFEPGLSRTRAMNLYELHVPLVLLAKSGFIAGKLKG-GELRA 456
            ..:|.:     .|:..::.::......||:...|::.. .....:||...|..:.:::. .|:|:
Mouse   722 QVVETRHGPSSVEIGHELFKLAQVLFNGLAVPEALSAI-WKAERILLVHCGPESEEVRELREMRS 785

  Fly   457 RLVDA 461
            .|:|:
Mouse   786 CLLDS 790

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.