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Protein Alignment SmydA-3 and Zmynd15
DIOPT Version :9
Sequence 1: | NP_001260366.1 |
Gene: | SmydA-3 / 34502 |
FlyBaseID: | FBgn0262599 |
Length: | 507 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001099270.1 |
Gene: | Zmynd15 / 287457 |
RGDID: | 1309845 |
Length: | 738 |
Species: | Rattus norvegicus |
Alignment Length: | 95 |
Identity: | 26/95 - (27%) |
Similarity: | 38/95 - (40%) |
Gaps: | 17/95 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 54 CLGCYEPNPDPEEELCSECGWPL-CVECAQQADNAHFRLECSQLKDARARFFRLPSGSRHCPQLD 117
|..|::.:.:.:...|.:|...| |.|...||| :| .|.. |...||: ||:|.
Rat 309 CHVCHKHSFEVKLTPCPQCSAVLYCGEACLQAD---WR-RCPD--DVSHRFW--------CPRLA 359
Fly 118 CIMPLRVLLAKEANPERWDNEVAPMEHHKE 147
..|.....|| :.|..:..||.....:||
Rat 360 AFMERAGELA--SLPFTYTAEVTSETFNKE 387
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
SmydA-3 | NP_001260366.1 |
SET |
<207..252 |
CDD:250181 |
|
Zmynd15 | NP_001099270.1 |
zf-MYND |
309..355 |
CDD:280009 |
15/59 (25%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG2084 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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