DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-3 and Smyd5

DIOPT Version :10

Sequence 1:NP_609464.1 Gene:SmydA-3 / 34502 FlyBaseID:FBgn0262599 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_659167.2 Gene:Smyd5 / 232187 MGIID:108048 Length:416 Species:Mus musculus


Alignment Length:329 Identity:61/329 - (18%)
Similarity:100/329 - (30%) Gaps:147/329 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 PEEELCS-------ECGWPLC------VECAQQADNAHFRLECSQLKDARARFFRLPSGSRHCPQ 115
            |..||||       .|  |.|      .||...|...:.::.|              .|..|.|:
Mouse    96 PHPELCSVRKDLHQNC--PHCQVMYCSAECRLAAAEQYHQILC--------------PGPSHDPR 144

  Fly   116 LDCIMPLRVLLAKEANPERWDNEVAPMEHHK----------EERQRDADVW------------HA 158
                .||..|      .|.|.:...|.|...          .::.:|.|.|            :.
Mouse   145 ----HPLNKL------QEAWRSVHYPPETASIMLMARMVATVKQAKDKDHWVRLFNHFCSRTANQ 199

  Fly   159 DRVNIAQYLRGPCQLANRFSEELIMQVVGVLEVNAFEAR-----SPKGYP--------------- 203
            ::..:.:.|:|      :|.::|.: ::|:.:...:|..     :|:|:.               
Mouse   200 EQAIVHKLLKG------KFKDQLEL-LLGLFKEALYEEALSLWFTPEGFRSLFALVGTNGQGIGT 257

  Fly   204 -----------------------------------------LRC----LFPYTGILAHNCVPNTS 223
                                                     |.|    ||.......|:||||..
Mouse   258 SSLSQWVHACDALELTPQDREQLDTFIDQLYKDIEAATGEFLNCEGSGLFVLQSCCNHSCVPNAE 322

  Fly   224 RSIYPSEGYKIRLRAMVDLEEGQPLHHSYTYTLD------GTAQRQKHLKQGKFFTCQCERCL-- 280
            .| :|...:.:.:.|:.|::.|:.:..||   ||      ....|.|.|::...|.|.|.:||  
Mouse   323 TS-FPENNFVLHVTALEDIKPGEEICISY---LDCCQRERSRHSRHKILRENYLFNCSCPKCLAE 383

  Fly   281 --DP 282
              ||
Mouse   384 ADDP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-3NP_609464.1 SET_SMYD <192..279 CDD:380997 27/157 (17%)
Smyd5NP_659167.2 SET_SMYD5 22..383 CDD:380919 59/323 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..416 2/5 (40%)

Return to query results.
Submit another query.