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Protein Alignment SmydA-3 and Smyd2

DIOPT Version :9

Sequence 1:	NP_001260366.1	Gene:	SmydA-3 / 34502	FlyBaseID:	FBgn0262599	Length:	507	Species:	Drosophila melanogaster
Sequence 2:	NP_081072.1	Gene:	Smyd2 / 226830	MGIID:	1915889	Length:	433	Species:	Mus musculus

Alignment Length:	451	Identity:	96/451 - (21%)
Similarity:	153/451 - (33%)	Gaps:	155/451 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly    26 AKGAI-------RGHGLLIEELPFAVGP---KCNGPVV------------CLGCYEPNPDPEEEL 68
            |:|.:       :|.||.... ||.||.   .|  |..            |..|:     ..:|.
Mouse     5 ARGGLERFCSAGKGRGLRALR-PFHVGDLLFSC--PAYACVLTVGERGHHCECCF-----ARKEG 61

  Fly    69 CSECGWPLC-------VECAQQADNAHFRLECSQLKDARARFFRLPSGSRHCPQLDCIMPLRVLL 126
            .|:||  .|       ||| |:.|....:||||.:         :..|....|.....:..|:|.
Mouse    62 LSKCG--RCKQAFYCDVEC-QKEDWPLHKLECSSM---------VVLGENWNPSETVRLTARILA 114

  Fly   127 AKEANPERWDNE----VAPMEHHKEERQRD-ADVWHADRVNIAQ----YLRGPCQLANRFSEELI 182
            .::.:|||..:|    |...|.|.::...: .|:..:|...:.|    ||..|       ....:
Mouse   115 KQKIHPERTPSEKLLAVREFESHLDKLDNEKKDLIQSDIAALHQFYSKYLEFP-------DHSSL 172

  Fly   183 MQVVGVLEVNAF----EARSPKGYPLRCLFPYTGILAHNCVPNTSRSIYPSEGYKIRLRAMVDLE 243
            :.:...:..|.|    |..|..|   ..:||...::.|:|.||.   |...:|....:||:.::.
Mouse   173 VVLFAQVNCNGFTIEDEELSHLG---SAIFPDVALMNHSCCPNV---IVTYKGTLAEVRAVQEIH 231

  Fly   244 EGQPLHHSYTYTLDGTAQRQKHLKQGKFFTCQCERCLDPTELGTHFSSLKCGQCAEGFQVPRQPT 308
            .|..:..||...|..|..|...|:...||||:|..|
Mouse   232 PGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCECREC----------------------------- 267

  Fly   309 EPDTSWNCANCGSDTSNADALAMLQSLQSEVNAVQALPMAAKRLEEIERLLRKYKSLLHPLHFIA 373
                         .|.:.|      ..:.||..:.:.|.|    |.|..::|..::
Mouse   268 -------------TTKDKD------KAKVEVRKLSSPPQA----EAIRDMVRYARN--------- 300

  Fly   374 TGLRQLLIEMYGRVQGYEMVQLPDHQLERKAELCRQVLRVLNTFEPGLSRTRAMNLYELHV 434
                  :||.:.|.:.|:.   |...|| ..||.::  ::.:.||..       |:|.||:
Mouse   301 ------VIEEFRRAKHYKS---PSELLE-ICELSQE--KMSSVFEDS-------NVYMLHM 342

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.