DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment porin and VDAC2

DIOPT Version :9

Sequence 1:NP_001033899.1 Gene:porin / 34500 FlyBaseID:FBgn0004363 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001318898.1 Gene:VDAC2 / 836886 AraportID:AT5G67500 Length:305 Species:Arabidopsis thaliana


Alignment Length:270 Identity:67/270 - (24%)
Similarity:124/270 - (45%) Gaps:21/270 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYKVKDYG 67
            |..::|:||:|:|:.::.||.. .|..:.|.::||:...:.  :.::.|.....:.|:||.|:  
plant     5 PGLFTDIGKKAKDLLTRDYNSD-QKFSISTYSASGVALTST--ALKKGGVHAADVATQYKYKN-- 64

  Fly    68 LTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDVNIDL 132
            .....|.:||:::.|.|.: .::|...|..  .:|.....| :.|.:|.|.|::....:...:. 
plant    65 ALFDVKIDTDSSVLTTVTL-TEILPSTKAI--ASFKVPDYN-SAKLEVQYFHDHATVTAAAALK- 124

  Fly   133 KGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVND-GQEFSGSI--- 193
            :.|||:.:|.||......|.:..:||.....|..|..:..|..|..|...:.| |.....|.   
plant   125 QNPLIDITATLGSPVISFGAEAGYDTTSKTFTKYNAGISVTKPDACLSIILGDKGDSLKASYLHH 189

  Fly   194 ---FQRTSDKLDVGVQLSWASGTSNTKFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLRDGVT 255
               |:||:...:|..:.|    |:.....:|..|.:|...:|:||:||...:|...|.::.....
plant   190 FDEFKRTAAVGEVYRKFS----TNENTITVGGLYAIDHSTAVKAKLNNHGTLGALLQHEVLPRSL 250

  Fly   256 LTLSTLVDGK 265
            :|:|:.:|.|
plant   251 VTVSSEIDTK 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
porinNP_001033899.1 Porin3_VDAC 3..281 CDD:132767 67/270 (25%)
VDAC2NP_001318898.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 101 1.000 Domainoid score I2322
eggNOG 1 0.900 - - E1_KOG3126
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 106 1.000 Inparanoid score I2108
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D938262at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11743
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.930

Return to query results.
Submit another query.