DRSC/TRiP Functional Genomics Resources

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Protein Alignment porin and Vdac1

DIOPT Version :9

Sequence 1:NP_001033899.1 Gene:porin / 34500 FlyBaseID:FBgn0004363 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_112643.1 Gene:Vdac1 / 83529 RGDID:621575 Length:283 Species:Rattus norvegicus


Alignment Length:280 Identity:164/280 - (58%)
Similarity:213/280 - (76%) Gaps:0/280 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYKVKDYG 67
            ||:|:||||.|||:|:|||.|||.|||||||:.:|:||.::|.:|.|:.||.|||||||:..:||
  Rat     4 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLETKYRWTEYG 68

  Fly    68 LTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDVNIDL 132
            ||.||||||||||.||:.|:|||..||||:.:.:|:|.:|.||.|.|..|..|::....||:.|:
  Rat    69 LTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHINLGCDVDFDI 133

  Fly   133 KGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVNDGQEFSGSIFQRT 197
            .||.|..:.||||:|||||||..|:|.:|::|.:|||:||.|.:|.|||.||||.||.|||:|:.
  Rat   134 AGPSIRGALVLGYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQLHTNVNDGTEFGGSIYQKV 198

  Fly   198 SDKLDVGVQLSWASGTSNTKFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLRDGVTLTLSTLV 262
            :.||:..|.|:|.:|.|||:|.|.||||:|.||...|||||:|.:||||.|.|:.|:.||||.|:
  Rat   199 NKKLETAVNLAWTAGNSNTRFGIAAKYQVDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALL 263

  Fly   263 DGKNFNAGGHKIGVGLELEA 282
            ||||.||||||:|:|||.:|
  Rat   264 DGKNVNAGGHKLGLGLEFQA 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
porinNP_001033899.1 Porin3_VDAC 3..281 CDD:132767 163/277 (59%)
Vdac1NP_112643.1 Porin3_VDAC 4..282 CDD:132767 163/277 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 353 1.000 Domainoid score I970
eggNOG 1 0.900 - - E1_KOG3126
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 362 1.000 Inparanoid score I2119
OMA 1 1.010 - - QHG51941
OrthoDB 1 1.010 - - D550640at33208
OrthoFinder 1 1.000 - - FOG0001091
OrthoInspector 1 1.000 - - otm45692
orthoMCL 1 0.900 - - OOG6_101484
Panther 1 1.100 - - O PTHR11743
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X928
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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