DRSC/TRiP Functional Genomics Resources

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Protein Alignment porin and Vdac1

DIOPT Version :10

Sequence 1:NP_476813.1 Gene:porin / 34500 FlyBaseID:FBgn0004363 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_063126031.1 Gene:Vdac1 / 83529 RGDID:621575 Length:303 Species:Rattus norvegicus


Alignment Length:280 Identity:164/280 - (58%)
Similarity:213/280 - (76%) Gaps:0/280 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYKVKDYG 67
            ||:|:||||.|||:|:|||.|||.|||||||:.:|:||.::|.:|.|:.||.|||||||:..:||
  Rat    24 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLETKYRWTEYG 88

  Fly    68 LTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDVNIDL 132
            ||.||||||||||.||:.|:|||..||||:.:.:|:|.:|.||.|.|..|..|::....||:.|:
  Rat    89 LTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHINLGCDVDFDI 153

  Fly   133 KGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVNDGQEFSGSIFQRT 197
            .||.|..:.||||:|||||||..|:|.:|::|.:|||:||.|.:|.|||.||||.||.|||:|:.
  Rat   154 AGPSIRGALVLGYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQLHTNVNDGTEFGGSIYQKV 218

  Fly   198 SDKLDVGVQLSWASGTSNTKFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLRDGVTLTLSTLV 262
            :.||:..|.|:|.:|.|||:|.|.||||:|.||...|||||:|.:||||.|.|:.|:.||||.|:
  Rat   219 NKKLETAVNLAWTAGNSNTRFGIAAKYQVDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALL 283

  Fly   263 DGKNFNAGGHKIGVGLELEA 282
            ||||.||||||:|:|||.:|
  Rat   284 DGKNVNAGGHKLGLGLEFQA 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
porinNP_476813.1 Porin3_VDAC 3..281 CDD:132767 163/277 (59%)
Vdac1XP_063126031.1 None

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