DRSC/TRiP Functional Genomics Resources

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Protein Alignment porin and vdac3

DIOPT Version :9

Sequence 1:NP_001033899.1 Gene:porin / 34500 FlyBaseID:FBgn0004363 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_012814379.1 Gene:vdac3 / 496695 XenbaseID:XB-GENE-949888 Length:300 Species:Xenopus tropicalis


Alignment Length:281 Identity:168/281 - (59%)
Similarity:218/281 - (77%) Gaps:1/281 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGI-EFNTAGHSNQESGKVFGSLETKYKVKDY 66
            ||:|:||||.|||:|:|||.|||.|||||||:|||: ||.::|.||.::||..|:||||||:|:.
 Frog    20 PPTYADLGKAARDVFNKGYGFGLVKLDLKTKSSSGVMEFTSSGSSNTDTGKASGNLETKYKMKEA 84

  Fly    67 GLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDVNID 131
            |:|.|:||||||||.||||::|:|..|||||::..|.|.:|.|:.|.|.:|..::.....|:::|
 Frog    85 GVTFTQKWNTDNTLGTEVAIEDKLATGLKLSVDTTFVPNTGKKSAKLKTSYKRDHANVGIDIDLD 149

  Fly   132 LKGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVNDGQEFSGSIFQR 196
            |.||.|....||||||||||||.||||.:|:|..||||||||..||.|||.||||.||.||::|:
 Frog   150 LAGPTIYGWGVLGYQGWLAGYQMAFDTAKSRLAQNNFALGYTAGDFQLHTNVNDGTEFGGSVYQK 214

  Fly   197 TSDKLDVGVQLSWASGTSNTKFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLRDGVTLTLSTL 261
            .|..::..|.|:|::|::||:|.||||||||...::.|||||||.:|:||.|.||.||.||||.|
 Frog   215 VSKDVETSVSLAWSAGSNNTRFGIGAKYQLDSGTTLSAKVNNASLIGVGYTQTLRPGVKLTLSAL 279

  Fly   262 VDGKNFNAGGHKIGVGLELEA 282
            ::||||:|||||:|:|.||||
 Frog   280 INGKNFSAGGHKVGLGFELEA 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
porinNP_001033899.1 Porin3_VDAC 3..281 CDD:132767 165/278 (59%)
vdac3XP_012814379.1 Porin3_VDAC 20..299 CDD:132767 165/278 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 368 1.000 Domainoid score I910
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 379 1.000 Inparanoid score I2019
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D550640at33208
OrthoFinder 1 1.000 - - FOG0001091
OrthoInspector 1 1.000 - - otm48781
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1638
SonicParanoid 1 1.000 - - X928
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.090

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