DRSC/TRiP Functional Genomics Resources

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Protein Alignment porin and Vdac3

DIOPT Version :9

Sequence 1:NP_001033899.1 Gene:porin / 34500 FlyBaseID:FBgn0004363 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001185927.1 Gene:Vdac3 / 22335 MGIID:106922 Length:284 Species:Mus musculus


Alignment Length:280 Identity:163/280 - (58%)
Similarity:216/280 - (77%) Gaps:1/280 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGI-EFNTAGHSNQESGKVFGSLETKYKVKDYG 67
            |:|.||||.|:|:|:|||.||:.|:|||||:.||: ||:|:||:..::||..|:|||||||.:||
Mouse     5 PTYCDLGKAAKDVFNKGYGFGMVKIDLKTKSCSGVMEFSTSGHAYTDTGKASGNLETKYKVCNYG 69

  Fly    68 LTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDVNIDL 132
            ||.|:||||||||.||::.:::|.|||||:|:..|.|.:|.|:||.|.:|..:.....|:|:||.
Mouse    70 LTFTQKWNTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYRRDCFSLGSNVDIDF 134

  Fly   133 KGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVNDGQEFSGSIFQRT 197
            .||.|...|||.::|||||||.:|||.:|||:.|||||||...||.|||.||||.||.|||:|:.
Mouse   135 SGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKV 199

  Fly   198 SDKLDVGVQLSWASGTSNTKFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLRDGVTLTLSTLV 262
            :::::..:.|:|.:|::||:|.|.|||:||...|:.|||||||.:||||.|.||.||.||||.|:
Mouse   200 NERIETSINLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALI 264

  Fly   263 DGKNFNAGGHKIGVGLELEA 282
            |||||||||||:|:|.||||
Mouse   265 DGKNFNAGGHKVGLGFELEA 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
porinNP_001033899.1 Porin3_VDAC 3..281 CDD:132767 160/277 (58%)
Vdac3NP_001185927.1 Porin3_VDAC 5..283 CDD:132767 160/277 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 353 1.000 Domainoid score I996
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 362 1.000 Inparanoid score I2175
Isobase 1 0.950 - 0 Normalized mean entropy S1329
OMA 1 1.010 - - QHG51941
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001091
OrthoInspector 1 1.000 - - otm43617
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11743
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1638
SonicParanoid 1 1.000 - - X928
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.050

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