DRSC/TRiP Functional Genomics Resources

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Protein Alignment porin and vdac-1

DIOPT Version :9

Sequence 1:NP_001033899.1 Gene:porin / 34500 FlyBaseID:FBgn0004363 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_501211.1 Gene:vdac-1 / 177524 WormBaseID:WBGene00019900 Length:283 Species:Caenorhabditis elegans


Alignment Length:286 Identity:113/286 - (39%)
Similarity:170/286 - (59%) Gaps:11/286 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAPPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSG--IEFNTAGHSNQESGKVFGSLETKYKV 63
            ||||:::||||.|:|:|:||||||..|:|..|:....  :||.:|...|..|||:.|:|:.|||:
 Worm     1 MAPPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLDVKYKI 65

  Fly    64 KDYGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDV 128
            ..||:||||||||:|.|.|.:.|.:|...|||::|:..:||.:|.::||.|:.:.....:..:||
 Worm    66 PQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDWALPTARVTADV 130

  Fly   129 NIDLKGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVNDGQEFSGSI 193
            .: ...|:|||:.|....|||.|....||:..:||...:.|.|::|..:.||:.|.:..:|..|:
 Worm   131 GV-TSAPVINAAGVFSRDGWLIGAAATFDSSSNKLAATSLAFGHSTPQYTLHSFVINSTDFGASL 194

  Fly   194 FQRTSDKLDVGVQLSWASGTSNTKFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLRDGVTLTL 258
            :.:.:..::||.||.|..|.:...:|:..||....|.:||||||::|||.:.....|...:.|||
 Worm   195 YHKVASNVEVGTQLGWKVGGNGADYALATKYAPSRDLTVRAKVNSSSQVAVAATHSLSPALKLTL 259

  Fly   259 STLVDGKNFNAG---GHKIGVGLELE 281
            ||     .||..   .||.|:|||.:
 Worm   260 ST-----QFNLAANDAHKFGLGLEFD 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
porinNP_001033899.1 Porin3_VDAC 3..281 CDD:132767 111/282 (39%)
vdac-1NP_501211.1 Porin3_VDAC 3..280 CDD:132767 111/282 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162457
Domainoid 1 1.000 216 1.000 Domainoid score I1563
eggNOG 1 0.900 - - E1_KOG3126
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37765
Inparanoid 1 1.050 225 1.000 Inparanoid score I2240
Isobase 1 0.950 - 0 Normalized mean entropy S1329
OMA 1 1.010 - - QHG51941
OrthoDB 1 1.010 - - D550640at33208
OrthoFinder 1 1.000 - - FOG0001091
OrthoInspector 1 1.000 - - otm14109
orthoMCL 1 0.900 - - OOG6_101484
Panther 1 1.100 - - LDO PTHR11743
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1638
SonicParanoid 1 1.000 - - X928
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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