DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17139 and Vdac1

DIOPT Version :10

Sequence 1:NP_001033898.1 Gene:CG17139 / 34497 FlyBaseID:FBgn0260454 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_063126031.1 Gene:Vdac1 / 83529 RGDID:621575 Length:303 Species:Rattus norvegicus


Alignment Length:301 Identity:77/301 - (25%)
Similarity:123/301 - (40%) Gaps:21/301 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EENKVEMLPPPPMEGEM---PSYFHVGLLAKMCLIHGYTIGRWKLQCTSKTEKDFYLSSFGEGYP 106
            :::|:|.....|:...|   |:|..:|..|:.....||..|..||...:|:|.....:|.|....
  Rat     5 QQSKMEAERSVPVCINMAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANT 69

  Fly   107 TWNTVYGGLEA---YKESGNFHASLAWLSDGDLLSDLGVHGDGLGGTWSTVLKSMVSYPEGRKFQ 168
            ....|.|.||.   :.|.| ...:..|.:|..|.:::.|. |.|.........|..|...|:| .
  Rat    70 ETTKVNGSLETKYRWTEYG-LTFTEKWNTDNTLGTEITVE-DQLARGLKLTFDSSFSPNTGKK-N 131

  Fly   169 CKLKCGFDR---NPG-KVEMYI--PIYKEPLLMGYIMMQPVKNYLLGYRTVFNVEDRDFNMHAFC 227
            .|:|.|:.|   |.| .|:..|  |..:..|::||      :.:|.||:..|...........|.
  Rat   132 AKIKTGYKREHINLGCDVDFDIAGPSIRGALVLGY------EGWLAGYQMNFETSKSRVTQSNFA 190

  Fly   228 GGYSNDVTEVGLKFENFKALRGSIFQRIGEKWAVALKANLYGNVSAKSVSIGGQYEWEPGSMLKA 292
            .||..|..::.....:.....|||:|::.:|...|:........|.....|..:|:.:|.:...|
  Rat   191 VGYKTDEFQLHTNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQVDPDACFSA 255

  Fly   293 KVRGDSRIGLIFQKKLREDIEVLFHVGFEGSDPINGKHKFG 333
            ||...|.|||.:.:.|:..|::......:|.:...|.||.|
  Rat   256 KVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLG 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17139NP_001033898.1 Porin3_VDAC 63..339 CDD:132767 72/280 (26%)
Vdac1XP_063126031.1 None

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