DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17139 and vdac2

DIOPT Version :10

Sequence 1:NP_001033898.1 Gene:CG17139 / 34497 FlyBaseID:FBgn0260454 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001016193.1 Gene:vdac2 / 548947 XenbaseID:XB-GENE-954839 Length:283 Species:Xenopus tropicalis


Alignment Length:290 Identity:64/290 - (22%)
Similarity:112/290 - (38%) Gaps:36/290 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 PSYFHVGLLAKMCLIHGYTIGRWKLQCTSKTEKDFYLSSFGEGYPTWNTVYGGLEAYKESGNFHA 126
            |||..:|..|:.....||..|..||...:|:......::.|........|.|.||...:.|.:..
 Frog     5 PSYADLGKSARDIFNKGYGFGLVKLDVKTKSATGVEFATSGSSNTDSGKVNGSLETKYKWGEYGL 69

  Fly   127 SLA--WLSDGDLLSDLGVH---GDGLGGTWSTVLKSMVSYPEGRKFQCKLKCGFDRNPGKVEMYI 186
            :..  |.:|..|.:::.:.   ..||..|:.|...     |...|...|:|..:.|.      |:
 Frog    70 TFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFS-----PNTGKKSGKVKAAYKRE------YV 123

  Fly   187 ------------PIYKEPLLMGYIMMQPVKNYLLGYRTVFNVEDRDFNMHAFCGGYSNDVTEVGL 239
                        |......::||      :.:|.||:..|:........:.|..||.....::..
 Frog   124 NLGCDVDFDFAGPAIHGSAVVGY------EGWLAGYQMTFDSAKSKLTKNNFAVGYKTGDFQLHT 182

  Fly   240 KFENFKALRGSIFQRIGEKWAVALK-ANLYGNVSAKSVSIGGQYEWEPGSMLKAKVRGDSRIGLI 303
            ...:.....|||:|::.:|...|:. |...||.|.: ..|..:|:.:..:.:.|||...|.:|:.
 Frog   183 NVNDGSEFAGSIYQKVSDKMETAVNLAWTSGNNSTR-FGIAAKYQLDSHASISAKVNNSSLVGVG 246

  Fly   304 FQKKLREDIEVLFHVGFEGSDPINGKHKFG 333
            :.:.||..:::......:|.:...|.||.|
 Frog   247 YTQTLRPGVKLTLSALVDGKNINAGGHKLG 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17139NP_001033898.1 Porin3_VDAC 63..339 CDD:132767 63/289 (22%)
vdac2NP_001016193.1 Porin3_VDAC 4..282 CDD:132767 64/290 (22%)

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