DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17139 and vdac2

DIOPT Version :10

Sequence 1:NP_001033898.1 Gene:CG17139 / 34497 FlyBaseID:FBgn0260454 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_955879.1 Gene:vdac2 / 322126 ZFINID:ZDB-GENE-030131-845 Length:283 Species:Danio rerio


Alignment Length:295 Identity:71/295 - (24%)
Similarity:114/295 - (38%) Gaps:46/295 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 PSYFHVGLLAKMCLIHGYTIGRWKLQCTSKTEKDFYLSSFGEGYPTWNTVYGGLEA-YKESG-NF 124
            |:|..:|..||.....||..|..||...:|:.......:.|......:.|.|.||. ||.|. ..
Zfish     5 PAYADLGKSAKDIFNKGYGFGMVKLDVKTKSASGVEFKTSGSSNTDTSKVVGSLETKYKRSEYGL 69

  Fly   125 HASLAWLSDGDLLSDLGVH---GDGLGGTWSTVLKSMVSYPEGRKFQCKLKCGFDR---NPG--- 180
            ..:..|.:|..|.:::.:.   ..||..|:.|...     |...|...|:|..:.|   |.|   
Zfish    70 TFTEKWNTDNTLGTEINIEDQIAKGLKLTFDTTFS-----PNTGKKSGKVKTAYKREFVNLGCDV 129

  Fly   181 KVEMYIPIYKEPLLMGYIMMQPVKNYLLGYRTVFNVEDRDFNMHAFCGGYS----------NDVT 235
            ..:...|......::||      :.:|.||:..|:........:.|..||.          ||.:
Zfish   130 DFDFAGPTIHGAAVVGY------EGWLAGYQMSFDTAKSKMTQNNFAVGYKTGDFQLHTNVNDGS 188

  Fly   236 EVGLKFENFKALRGSIFQRIGEKWAVALKANLYGNVSAKSVSIG--GQYEWEPGSMLKAKVRGDS 298
            |.|          |||:|::.:|...|:  ||.....:.|...|  .:|:.:..:.:.|||...|
Zfish   189 EFG----------GSIYQKVSDKLETAV--NLAWTAGSNSTRFGIAAKYQLDKDASISAKVNNTS 241

  Fly   299 RIGLIFQKKLREDIEVLFHVGFEGSDPINGKHKFG 333
            .:|:.:.:.||..|::......:|....:|.||.|
Zfish   242 LVGVGYTQSLRPGIKLTLSALVDGKSINSGGHKLG 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17139NP_001033898.1 Porin3_VDAC 63..339 CDD:132767 70/294 (24%)
vdac2NP_955879.1 Porin3_VDAC 4..282 CDD:132767 71/295 (24%)

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