DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17134 and APA1

DIOPT Version :10

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001322792.1 Gene:APA1 / 837740 AraportID:AT1G11910 Length:517 Species:Arabidopsis thaliana


Alignment Length:484 Identity:174/484 - (35%)
Similarity:235/484 - (48%) Gaps:126/484 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LNRVQLQVNKNFTKTHGSVKAEKTVLASKYSFLAETSFSVSSSGATE--NLHNSMNNEYYGVIAI 82
            |.:::|. :||........|.||.:.|          :.:..||..:  .|.|.::.:|||.|||
plant    46 LKKLKLD-SKNRLAARVESKQEKPLRA----------YRLGDSGDADVVVLKNYLDAQYYGEIAI 99

  Fly    83 GTPEQRFNILFDTGSANLWVPSASCPASNTACQRHNKYDSSASSTYVANGEEFAIEYGTGSLSGF 147
            |||.|:|.::|||||:||||||:.|..| .||..|.||.||.||||..||:..||.||||:::||
plant   100 GTPPQKFTVVFDTGSSNLWVPSSKCYFS-LACLLHPKYKSSRSSTYEKNGKAAAIHYGTGAIAGF 163

  Fly   148 LSNDIVTIAGISIQNQTFGEALSEPGTTFVDAPFAGILGLAFSAIAVDGVTPPFDNMISQGLLDE 212
            .|||.||:..:.:::|.|.||..|||.|||.|.|.|||||.|..|:|....|.:.||:.|||:.|
plant   164 FSNDAVTVGDLVVKDQEFIEATKEPGITFVVAKFDGILGLGFQEISVGKAAPVWYNMLKQGLIKE 228

  Fly   213 PVISFYLKRQGTAVRGGELILGGIDSSLYRGSLTYVPVSVPAYWQFKVNTIKTNG--TLLC-NGC 274
            ||.||:|.|......||||:.||:|.:.::|..|||||:...||||.:..:...|  |..| :||
plant   229 PVFSFWLNRNADEEEGGELVFGGVDPNHFKGKHTYVPVTQKGYWQFDMGDVLIGGAPTGFCESGC 293

  Fly   275 QAIADTGTSLIAVPLAAYRKINRQLGA-------------------------------------- 301
            .||||:||||:|.|......||..:||                                      
plant   294 SAIADSGTSLLAGPTTIITMINHAIGAAGVVSQQCKTVVDQYGQTILDLLLSETQPKKICSQIGL 358

  Fly   302 ----------------TDND--------------------------------------------- 305
                            .|.:                                             
plant   359 CTFDGTRGVSMGIESVVDKENAKLSNGVGDAACSACEMAVVWIQSQLRQNMTQERILNYVNELCE 423

  Fly   306 ------GEAFVRCGRVSSLPKVNLNIGGTVFTLAPRDYIVKVTQNGQTYCMSAFTYMEGL----S 360
                  ||:.|.|.::|::|.|:|.|||.||.|||.:|::||.:.....|:|.|..::..    .
plant   424 RLPSPMGESAVDCAQLSTMPTVSLTIGGKVFDLAPEEYVLKVGEGPVAQCISGFIALDVAPPRGP 488

  Fly   361 FWILGDVFIGKFYTVFDKGNERIGFARVA 389
            .|||||||:||::||||.|||::|||..|
plant   489 LWILGDVFMGKYHTVFDFGNEQVGFAEAA 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:472175 160/427 (37%)
APA1NP_001322792.1 phytepsin 83..515 CDD:133162 162/432 (38%)
SapB_2 326..359 CDD:460945 0/32 (0%)
SapB_1 391..426 CDD:461575 0/34 (0%)

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