DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17134 and AT4G04460

DIOPT Version :10

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_192355.1 Gene:AT4G04460 / 825776 AraportID:AT4G04460 Length:508 Species:Arabidopsis thaliana


Alignment Length:510 Identity:172/510 - (33%)
Similarity:237/510 - (46%) Gaps:138/510 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLVLLVLVG-------------IGHSAAKLNRVQLQVNKNFTKTHGSVKAEKTVLASKYSFLAET 55
            ||..|:|:.             ||....||:|.....::.|.|..||..:.|..           
plant    13 LLSCLILISTASCERNGDGTIRIGLKKRKLDRSNRLASQLFLKNRGSHWSPKHY----------- 66

  Fly    56 SFSVSSSGA-TENLHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTACQRHNK 119
             |.::...| ...|.|.::.:|||.|.||||.|:|.::|||||:|||:||..|..| .||..|:|
plant    67 -FRLNDENADMVPLKNYLDAQYYGDITIGTPPQKFTVIFDTGSSNLWIPSTKCYLS-VACYFHSK 129

  Fly   120 YDSSASSTYVANGEEFAIEYGTGSLSGFLSNDIVTIAGISIQNQTFGEALSEPGTTFVDAPFAGI 184
            |.:|.||:|..||:..:|.||||::||:.|||.|.:..|.::.|.|.||.||||.||:.|.|.||
plant   130 YKASQSSSYRKNGKPASIRYGTGAISGYFSNDDVKVGDIVVKEQEFIEATSEPGITFLLAKFDGI 194

  Fly   185 LGLAFSAIAVDGVTPPFDNMISQGLLDEPVISFYLKRQGTAVRGGELILGGIDSSLYRGSLTYVP 249
            |||.|..|:|...||.:.||:.:||:.||:.||:|.|......|||::.||:|...::|..|:||
plant   195 LGLGFKEISVGNSTPVWYNMVEKGLVKEPIFSFWLNRNPKDPEGGEIVFGGVDPKHFKGEHTFVP 259

  Fly   250 VSVPAYWQFKVNTIKTNG--TLLC-NGCQAIADTGTSLIAVPLAAYRKINRQLGATD-------- 303
            |:...||||.:..::..|  |..| .||.||||:||||:..|......||..:||..        
plant   260 VTHKGYWQFDMGDLQIAGKPTGYCAKGCSAIADSGTSLLTGPSTVITMINHAIGAQGIVSRECKA 324

  Fly   304 ---------------------------------------------NDG----------------- 306
                                                         :||                 
plant   325 VVDQYGKTMLNSLLAQEDPKKVCSQIGVCAYDGTQSVSMGIQSVVDDGTSGLLNQAMCSACEMAA 389

  Fly   307 --------------------------------EAFVRCGRVSSLPKVNLNIGGTVFTLAPRDYIV 339
                                            ::.|.||||||:|.|..:|||..|.|.|:|||.
plant   390 VWMESELTQNQTQERILAYAAELCDHIPTQNQQSAVDCGRVSSMPIVTFSIGGRSFDLTPQDYIF 454

  Fly   340 KVTQNGQTYCMSAFTYME-----GLSFWILGDVFIGKFYTVFDKGNERIGFARVA 389
            |:.:..::.|.|.||.|:     | ..|||||:|:|.::||||.|..|:|||:.|
plant   455 KIGEGVESQCTSGFTAMDIAPPRG-PLWILGDIFMGPYHTVFDYGKGRVGFAKAA 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:472175 152/425 (36%)
AT4G04460NP_192355.1 phytepsin 77..506 CDD:133162 154/430 (36%)
SapB_2 321..353 CDD:460945 0/31 (0%)
SapB_1 380..417 CDD:461575 0/36 (0%)

Return to query results.
Submit another query.