DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17134 and AT3G51330

DIOPT Version :10

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_566948.1 Gene:AT3G51330 / 824296 AraportID:AT3G51330 Length:529 Species:Arabidopsis thaliana


Alignment Length:478 Identity:105/478 - (21%)
Similarity:165/478 - (34%) Gaps:124/478 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RQLLVLLVLV----GIGHSAAKLNRVQLQVNKNFT----KTHG--SVKAEKTVLASKYSFLAETS 56
            ||:.|||.|:    |:....|. .:...:|:..|:    ::.|  .:..||..| ..:..||:..
plant     5 RQVFVLLSLLVVCWGLERCEAS-GKFSFEVHHMFSDRVKQSLGLDDLVPEKGSL-EYFKVLAQRD 67

  Fly    57 FSVSSSGATENLHNSMNNE--------------------YYGVIAIGTPEQRFNILFDTGS---- 97
            ..:...|...|     |.|                    :|..:::|||...|.:..||||    
plant    68 RLIRGRGLASN-----NEETPITFMRGNRTISIDLLGFLHYANVSVGTPATWFLVALDTGSDLFW 127

  Fly    98 -----------------------ANLWVPSASCPASNTACQRHNKYDSSASSTYVANGEEFAIEY 139
                                   .||:.|:.|..:|:..|.....:.||..|: .|:...:.|:|
plant   128 LPCNCGSTCIRDLKEVGLSQSRPLNLYSPNTSSTSSSIRCSDDRCFGSSRCSS-PASSCPYQIQY 191

  Fly   140 GTGS--LSGFLSNDIVTIA----GIS--IQNQTFGEALSEPGTTFVDAPFAGILGLAFSAIAVDG 196
            .:..  .:|.|..|::.:.    |:.  ..|.|.|...::.|.....|...|:|||         
plant   192 LSKDTFTTGTLFEDVLHLVTEDEGLEPVKANITLGCGKNQTGFLQSSAAVNGLLGL--------- 247

  Fly   197 VTPPFDNMISQGLLDEPVISFYLKRQGTAVRGGELILGGIDSSLYR---GSLTY--------VPV 250
                       ||.|..|.|...|.:.|| ....:..|.|...:.|   |...|        :|.
plant   248 -----------GLKDYSVPSILAKAKITA-NSFSMCFGNIIDVVGRISFGDKGYTDQMETPLLPT 300

  Fly   251 SVPAYWQFKVNTIKTNGTLLCNGCQAIA--DTGTSLIAVPLAAYRKINRQLG--ATDN----DGE 307
            .....:...|..:...|..:  |.|.:|  |||||...:....|..|.:...  .||.    |.|
plant   301 EPSPTYAVSVTEVSVGGDAV--GVQLLALFDTGTSFTHLLEPEYGLITKAFDDHVTDKRRPIDPE 363

  Fly   308 -AFVRCGRVSS------LPKVNLNI-GGTVFTLAPRDYIVKVTQNGQTYCMSAFTYMEGLSFWIL 364
             .|..|..:|.      .|:|.:.. ||:...|....:||....|...||:.....:: ....|:
plant   364 LPFEFCYDLSPNKTTILFPRVAMTFEGGSQMFLRNPLFIVWNEDNSAMYCLGILKSVD-FKINII 427

  Fly   365 GDVFIGKFYTVFDKGNERIGFAR 387
            |..|:..:..|||:....:|:.|
plant   428 GQNFMSGYRIVFDRERMILGWKR 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:472175 86/397 (22%)
AT3G51330NP_566948.1 pepsin_retropepsin_like 102..453 CDD:472175 85/374 (23%)

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