DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17134 and bace1

DIOPT Version :9

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001072485.1 Gene:bace1 / 779940 XenbaseID:XB-GENE-5787150 Length:502 Species:Xenopus tropicalis


Alignment Length:372 Identity:111/372 - (29%)
Similarity:172/372 - (46%) Gaps:57/372 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 ENLHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTACQRHNKYDSSASSTYVA 130
            :||.......||..:.:|||.|..|||.||||:|..|.:|..|    ..:|:  |....|.||..
 Frog    66 DNLRGKSGQGYYVEMRVGTPPQTLNILVDTGSSNFAVGAAPHP----FLKRY--YHRQHSRTYRD 124

  Fly   131 NGEEFAIEYGTGSLSGFLSNDIVTIA-GISIQNQTFGEALSEPGTTFVD-APFAGILGLAFSAIA 193
            ......:.|..|...|.|..|:|||. |.::.......|:::....|:: :.:.||||||::.||
 Frog   125 VRRGVYVPYTQGKWEGELGTDLVTIPHGPNVTVTANIAAITDSDKFFINGSNWEGILGLAYAEIA 189

  Fly   194 --VDGVTPPFDNMISQGLLDEPVISFYLKRQGT----------AVRGGELILGGIDSSLYRGSLT 246
              .|.:.|.||:::.|..:  |.| |.|:..||          |..||.:::||||.|||.||:.
 Frog   190 RPDDTLEPFFDSLVKQTRV--PNI-FSLQLCGTGFHFNESDTSASVGGSMVIGGIDPSLYIGSIW 251

  Fly   247 YVPVSVPAYWQFKVNTIKTNGTLLCNGC------QAIADTGTSLIAVPLAAYRKINRQLGATDND 305
            |.|:....|::..:..|:.||..|...|      ::|.|:||:.:.:|...:....:.:.|..:.
 Frog   252 YTPIRKEWYYEVIIVKIEINGQDLHMDCKEYNYDKSIVDSGTTNLRLPKRVFDAAVKSIKAASST 316

  Fly   306 ---------GEAFVRCGRVSS-----LPKVNLNIGGTV------FTLAPRDYI--VKVTQNGQTY 348
                     ||..| |.:..:     .|.::|.:.|.|      .|:.|:.|:  |:.....|..
 Frog   317 EKFPDGFWLGEQLV-CWQEGTTPWHIFPVISLYLMGEVANQSFKITILPQQYLRPVEDIATAQED 380

  Fly   349 CMSAFTYMEGLSFWILGDVFIGKFYTVFDKGNERIGFA----RVADY 391
            |.. |...:..:..::|.|.:..||.|||:.|:|||||    .|.||
 Frog   381 CYK-FAVSQSTTGTVMGAVIMEGFYVVFDRANKRIGFAVSTCHVHDY 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:299705 104/357 (29%)
Asp 75..388 CDD:278455 106/358 (30%)
bace1NP_001072485.1 beta_secretase_like 73..438 CDD:133140 109/365 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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