DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17134 and ctsd

DIOPT Version :9

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_571785.2 Gene:ctsd / 65225 ZFINID:ZDB-GENE-010131-8 Length:398 Species:Danio rerio


Alignment Length:396 Identity:171/396 - (43%)
Similarity:243/396 - (61%) Gaps:14/396 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QLLVLLVLVGIGHSAAKLNRVQLQVNKNFTKT-HGSVKAEKTVLASKYSFLAETSFSVSSSGATE 66
            ::..||::|....::..:.|:.|:..:...:| ..|.::.:.:::|..|......|..|:....|
Zfish     2 RIAFLLLVVAFFCTSDAIVRIPLKKFRTLRRTLSDSGRSLEELVSSSNSLKYNLGFPASNDPTPE 66

  Fly    67 NLHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTACQRHNKYDSSASSTYVAN 131
            .|.|.::.:|||.|.:|||.|.|.::|||||:||||||..|..::.||..|:||:...|||||.|
Zfish    67 TLKNYLDAQYYGEIGLGTPVQTFTVVFDTGSSNLWVPSVHCSLTDIACLLHHKYNGGKSSTYVKN 131

  Fly   132 GEEFAIEYGTGSLSGFLSNDIVTIAGISIQNQTFGEALSEPGTTFVDAPFAGILGLAFSAIAVDG 196
            |.:|||:||:|||||:||.|..||..|:::.|.||||:.:||..|:.|.|.||||:|:..|||||
Zfish   132 GTQFAIQYGSGSLSGYLSQDTCTIGDIAVEKQIFGEAIKQPGVAFIAAKFDGILGMAYPRIAVDG 196

  Fly   197 VTPPFDNMISQGLLDEPVISFYLKRQGTAVRGGELILGGIDSSLYRGSLTYVPVSVPAYWQFKVN 261
            |.|.||.|:||..:::.|.||||.|......||||:|||.|...|.|...||.:|..||||..::
Zfish   197 VPPVFDMMMSQKKVEKNVFSFYLNRNPDTQPGGELLLGGTDPKYYTGDFNYVDISRQAYWQIHMD 261

  Fly   262 TIKT-NGTLLC-NGCQAIADTGTSLIAVPLAAYRKINRQLGATD-NDGEAFVRCGRVSSLPKVNL 323
            .:.. :|..|| .||:||.|||||||..|.|..:.:.:.:||.. ..||..|.|.:|.:||.::.
Zfish   262 GMSIGSGLSLCKGGCEAIVDTGTSLITGPAAEVKALQKAIGAIPLMQGEYMVDCKKVPTLPTISF 326

  Fly   324 NIGGTVFTLAPRDYIVKVTQNGQTYCMSAFTYMEGLS-------FWILGDVFIGKFYTVFDKGNE 381
            ::||.|::|....||:|.:|.|...|:|.|.   ||.       .|||||||||::|||||:.|.
Zfish   327 SLGGKVYSLTGEQYILKESQGGHDICLSGFM---GLDIPPPAGPLWILGDVFIGQYYTVFDRENN 388

  Fly   382 RIGFAR 387
            |:|||:
Zfish   389 RVGFAK 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:299705 156/325 (48%)
Asp 75..388 CDD:278455 157/323 (49%)
ctsdNP_571785.2 A1_Propeptide 19..44 CDD:285240 4/24 (17%)
Cathepsin_D2 70..394 CDD:133157 157/326 (48%)
Asp 75..395 CDD:278455 157/323 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.890

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