DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17134 and pgc.2

DIOPT Version :10

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001025603.1 Gene:pgc.2 / 594991 XenbaseID:XB-GENE-964422 Length:385 Species:Xenopus tropicalis


Alignment Length:372 Identity:160/372 - (43%)
Similarity:216/372 - (58%) Gaps:32/372 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VNKNFTKTHGSVKAEKTVLASKYSFLAETSFSVSSSGATENLHNSMNNEYYGVIAIGTPEQRFNI 91
            |.|.|.|||      |...|.||.:..:..|::    |.|.::  |:..|||.|::|||.|.|.:
 Frog    37 VLKEFMKTH------KREPAMKYKYNLKNDFAI----AYEPMY--MDAAYYGQISVGTPPQNFMV 89

  Fly    92 LFDTGSANLWVPSASCPASNTACQRHNKYDSSASSTYVANGEEFAIEYGTGSLSGFLSNDIVTIA 156
            ||||||:||||.|..|.:.  |||.|..::.|.||||.:..::|:|.||:|||:|....|.||:.
 Frog    90 LFDTGSSNLWVASTYCQSG--ACQNHPLFNPSQSSTYTSKNQQFSITYGSGSLTGVFGYDTVTVQ 152

  Fly   157 GISIQNQTFGEALSEPGTTFVDAPFAGILGLAFSAIAVDGVTPPFDNMISQGLLDEPVISFYLKR 221
            |:||.||..|.:::||||.||.:.|.||.|:|:.|:|..|.|.|...|:.|.||..|:.|.|:..
 Frog   153 GLSITNQEIGLSINEPGTNFVYSSFEGIFGMAYPALAAGGATTPMQGMLQQNLLTYPIFSVYMSS 217

  Fly   222 QGTAVRGGELILGGIDSSLYRGSLTYVPVSVPAYWQFKVNTIKTNG--TLLCN-GCQAIADTGTS 283
            |     .||:|.||:|||||.|.:.:.||:...|||..::....||  |..|: ||||:.|||||
 Frog   218 Q-----SGEVIFGGVDSSLYSGQIYWAPVTQELYWQIAIDEFSINGQATGWCSQGCQAMVDTGTS 277

  Fly   284 LIAVPLAAYRKINRQLGATDND-GEAFVRCGRVSSLPKVNLNIGGTVFTLAPRDYIVKVTQNGQT 347
            |:.||........:.|||..|. ||..|.|..|.|||.::..|.|..|.:.|..||::  .||  
 Frog   278 LLTVPQQFMGTFLQSLGAQQNQYGEYIVNCNNVQSLPPISFTINGVQFPIPPSAYILQ--NNG-- 338

  Fly   348 YCMSA--FTYM---EGLSFWILGDVFIGKFYTVFDKGNERIGFARVA 389
            ||...  .||:   .|..||||||||:.::|:|:|.||.|:|||:.|
 Frog   339 YCSVGVEVTYLPSQNGQPFWILGDVFLRQYYSVYDMGNNRVGFAQSA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:472175 144/324 (44%)
pgc.2NP_001025603.1 A1_Propeptide 19..45 CDD:462326 4/7 (57%)
pepsin_retropepsin_like 71..382 CDD:472175 143/321 (45%)

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