DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17134 and Cym

DIOPT Version :10

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_064476.2 Gene:Cym / 56825 RGDID:708486 Length:379 Species:Rattus norvegicus


Alignment Length:395 Identity:154/395 - (38%)
Similarity:220/395 - (55%) Gaps:26/395 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRQLLVLLVLVGIGHSAAKLNRVQLQVNK---NFTKTHGSVKAEKTVLASKYSFLAETSFSVSSS 62
            ||..::||.::.|..|.. :.|:.|...|   |..|..|.:  |..:...:|.|    |...|:.
  Rat     1 MRCFVLLLAVLAIAQSHV-VTRIPLHKGKSLRNTLKEQGLL--EDFLRRHQYEF----SEKNSNI 58

  Fly    63 G--ATENLHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTACQRHNKYDSSAS 125
            |  |:|.|.|.:::||:|:|.:|||.|.|.::|||||:.|||||..|  |:..|:.||::|.|.|
  Rat    59 GVVASEPLTNYLDSEYFGLIYVGTPPQEFKVVFDTGSSELWVPSVYC--SSKVCRNHNRFDPSKS 121

  Fly   126 STYVANGEEFAIEYGTGSLSGFLSNDIVTIAGISIQNQTFGEALSEPGTTFVDAPFAGILGLAFS 190
            .|:....:...::|||||:.|||:.|.||::.|.:.:||.|.:..|||..|..:||.||||||:.
  Rat   122 FTFQNLSKPLFVQYGTGSVEGFLAYDTVTVSDIVVPHQTVGLSTEEPGDIFTYSPFDGILGLAYP 186

  Fly   191 AIAVDGVTPPFDNMISQGLLDEPVISFYLKRQGTAVRGGELILGGIDSSLYRGSLTYVPVSVPAY 255
            ..|.....|.||||:::.|:.:.:.|.|:.|..   :|..|.||.||.|.:.|||.:|||:|..|
  Rat   187 TFASKYSVPIFDNMMNRHLVAQDLFSVYMSRND---QGSMLTLGAIDQSYFIGSLHWVPVTVQGY 248

  Fly   256 WQFKVNTIKTNGTLLC--NGCQAIADTGTSLIAVPLAAYRKINRQLGATDNDGEAF-VRCGRVSS 317
            |||.|:.|..|..::.  .||.|:.||||:|:..|......|...:||.....:.| :.|.|::.
  Rat   249 WQFTVDRITINDEVVACQGGCPAVLDTGTALLTGPGRDILNIQHAIGAVQGQHDQFDIDCWRLNF 313

  Fly   318 LPKVNLNIGGTVFTLAPRDYIVKVTQNGQTYCMSAFTYMEGLSFWILGDVFIGKFYTVFDKGNER 382
            :|.|...|.|..|.|.|..|    |...|..|.|.|.:  |...||||||||.:||:|||:.|.|
  Rat   314 MPTVVFEINGREFPLPPSAY----TNQFQGSCSSGFRH--GSQMWILGDVFIREFYSVFDRANNR 372

  Fly   383 IGFAR 387
            :|.|:
  Rat   373 VGLAK 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:472175 132/318 (42%)
CymNP_064476.2 A1_Propeptide 21..47 CDD:462326 7/27 (26%)
pepsin_retropepsin_like 64..377 CDD:472175 134/323 (41%)

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