DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17134 and CG5863

DIOPT Version :10

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_650623.1 Gene:CG5863 / 42096 FlyBaseID:FBgn0038507 Length:395 Species:Drosophila melanogaster


Alignment Length:374 Identity:187/374 - (50%)
Similarity:246/374 - (65%) Gaps:5/374 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KLNRVQLQVNKNFTKTHGSVKAEKTVLASKYSFLAETSFSVSSSGATENLHNSMNNEYYGVIAIG 83
            :|.|:.:|...:|..:....:|.::.|.:||:.:.....:..:.||||.|.|.:|.||.|.|:||
  Fly    24 QLIRIPMQFQASFMASRRQHRAGRSSLLAKYNVVGGQEVTSRNGGATETLDNRLNLEYAGPISIG 88

  Fly    84 TPEQRFNILFDTGSANLWVPSASCPASNTACQRHNKYDSSASSTYVANGEEFAIEYGTGSLSGFL 148
            :|.|.||:||||||||||||||.|...:.||..|::|::|||||:|.:|..|:|.||||||||.|
  Fly    89 SPGQPFNMLFDTGSANLWVPSAECSPKSVACHHHHRYNASASSTFVPDGRRFSIAYGTGSLSGRL 153

  Fly   149 SNDIVTIAGISIQNQTFGEALSEPGTTFVDAPFAGILGLAFSAIAVDGVTPPFDNMISQGLLDEP 213
            :.|.|.|..:.:||||||.|..|||.||||..||||:||.|..||..|:.|.|::|..|.|:||.
  Fly   154 AQDTVAIGQLVVQNQTFGMATHEPGPTFVDTNFAGIVGLGFRPIAELGIKPLFESMCDQQLVDEC 218

  Fly   214 VISFYLKRQGTAVRGGELILGGIDSSLYRGSLTYVPVSVPAYWQFKVNTIKTNGTLLCNGCQAIA 278
            |.||||||.|:..:||||:.||:|.:.:.|||||||::...||||.::.|:..||.:....||||
  Fly   219 VFSFYLKRNGSERKGGELLFGGVDKTKFSGSLTYVPLTHAGYWQFPLDVIEVAGTRINQNRQAIA 283

  Fly   279 DTGTSLIAVPLAAYRKINRQLGA--TDNDGEAFVRCGRVSSLPKVNLNIGGTVFTLAPRDYIVKV 341
            ||||||:|.|...|..||..||.  |.|: |..:.|..:.|||::...|||..|.|.||||::..
  Fly   284 DTGTSLLAAPPREYLIINSLLGGLPTSNN-EYLLNCSEIDSLPEIVFIIGGQRFGLQPRDYVMSA 347

  Fly   342 T-QNGQTYCMSAFTYMEGLSFWILGDVFIGKFYTVFDKGNERIGFARVA 389
            | .:|.:.|:||||.|:. .||||||||||::||.||.|..|||||..|
  Fly   348 TNDDGSSICLSAFTLMDA-EFWILGDVFIGRYYTAFDAGQRRIGFAPAA 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:472175 171/318 (54%)
CG5863NP_650623.1 Asp 80..394 CDD:394983 171/315 (54%)

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