DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17134 and bace1

DIOPT Version :10

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001428889.1 Gene:bace1 / 403005 ZFINID:ZDB-GENE-040426-1835 Length:522 Species:Danio rerio


Alignment Length:445 Identity:114/445 - (25%)
Similarity:195/445 - (43%) Gaps:76/445 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLVLVGIGHSAAKL------NRVQLQVNKNFTKTHGSVKAEKTVLASKYSFLAETSFSVSSSGAT 65
            ||:|.|:....|:|      ..:::.:.:.....|.:..|.::..:.:......|| .:|.....
Zfish     6 LLLLCGVAVCVARLCASSGPALLRVPLRQGPLTPHSTPAAHRSPHSPRVRSRRATS-GISFINMI 69

  Fly    66 ENLHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTACQRHNKYDSSASSTYVA 130
            :||.......||..:|:|:|.||.|||.||||:|..|.:|:.|.      .|..|..|.||:|..
Zfish    70 DNLRGKSGQGYYIEMAVGSPAQRLNILVDTGSSNFAVGAAAHPF------LHRYYHRSLSSSYRD 128

  Fly   131 NGEEFAIEYGTGSLSGFLSNDIVTI-AGISIQNQTFGEALSEPGTTFVD-APFAGILGLAFSAIA 193
            .|....:.|..|...|.|..|:|:: .|.::..:....|:::....|:: :.:.||||||::.||
Zfish   129 LGRGVYVPYTQGRWEGELGTDVVSVPCGPNVSLRANIAAITQSDRFFINGSNWEGILGLAYAEIA 193

  Fly   194 VDGVT--PPFDNMISQGLLDEPVISFYLKRQG---------TAVRGGELILGGIDSSLYRGSLTY 247
            ....|  |.||:::.|..:.: |.|..|...|         ::..||.:|:||:|.|||.|.|.|
Zfish   194 RPDETLEPFFDSLLRQSTVAD-VFSLQLCGAGYSHNYSTGSSSTVGGSMIIGGVDPSLYVGELWY 257

  Fly   248 VPVSVPAYWQFKVNTIKTNGTLLCNGC------QAIADTGTSLIAVP----------LAAYRKIN 296
            .|:....|::..:..|:.||..|...|      ::|.|:||:.:.:|          :.|...:.
Zfish   258 TPIRREWYYEVIIVRIEVNGQDLNMDCKEYNYDKSIVDSGTTNLRLPRKVFQAAVKAIEAASSVY 322

  Fly   297 RQLGATDND----------------GEAFVRCGRVSSLP------------KVNLNIGGTVFTLA 333
            .:.....:|                ||..| |.:..:.|            ..|.|....: ::.
Zfish   323 SEYSCAHSDSAWCPQTEQFPSGFWLGEQLV-CWQAGTTPWHIFPVISLYLMSENRNQSFRI-SIL 385

  Fly   334 PRDYI--VKVTQNGQTYCMSAFTYMEGLSFWILGDVFIGKFYTVFDKGNERIGFA 386
            |:.|:  |:...:.|..|.. |...:..:..::|.|.:..||.||::.::|||||
Zfish   386 PQQYLRPVEDVASAQEDCYK-FAVSQSSTGTVMGAVIMEGFYVVFERQHKRIGFA 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:472175 99/374 (26%)
bace1NP_001428889.1 None

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