DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17134 and ctsd

DIOPT Version :10

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_988964.1 Gene:ctsd / 394561 XenbaseID:XB-GENE-5906945 Length:398 Species:Xenopus tropicalis


Alignment Length:399 Identity:171/399 - (42%)
Similarity:239/399 - (59%) Gaps:29/399 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLVLVGIGHSAAKLNRVQLQVNKNFTK--------THGSVKAEKTVLASKYSFLAETSFSVSSSG 63
            ||.|..:....:.|.|:.|   |.||.        ...::|......|:|||     :|..|.:.
 Frog     9 LLALCCVMQPGSSLVRIPL---KKFTSIRRAMSETDQDALKLSGNEAATKYS-----AFLNSKNP 65

  Fly    64 ATENLHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTACQRHNKYDSSASSTY 128
            ..|.|.|.::.:|||.|.||||.|.|.::|||||:||||||..|...:.||..|:|||||.|:||
 Frog    66 TPETLLNYLDAQYYGEIGIGTPPQPFTVVFDTGSSNLWVPSIHCSFWDLACWLHHKYDSSKSTTY 130

  Fly   129 VANGEEFAIEYGTGSLSGFLSNDIVTIAGISIQNQTFGEALSEPGTTFVDAPFAGILGLAFSAIA 193
            :.||.||||:||:|||:|:||.|.|||..:::..|.|.||:.:||.|||.|.|.||||:.:..|:
 Frog   131 INNGTEFAIQYGSGSLTGYLSKDTVTIGDLAVNGQFFAEAIKQPGITFVAAKFDGILGMGYPKIS 195

  Fly   194 VDGVTPPFDNMISQGLLDEPVISFYLKRQGTAVRGGELILGGIDSSLYRGSLTYVPVSVPAYWQF 258
            ||||.|.||:::.|.|:|..:.||||.|....:.||||:|||.|.:.|.|...|:.|:..||||.
 Frog   196 VDGVPPVFDDIMEQKLVDSNIFSFYLNRNPDTLPGGELLLGGTDPAFYTGDFNYMNVTRKAYWQI 260

  Fly   259 KVNTIKTNGTL-LC-NGCQAIADTGTSLIAVPLAAYRKINRQLGATD-NDGEAFVRCGRVSSLPK 320
            .::.:.....| || :||:||.|||||||..|:.....:.|.:||.. ..||..:.|..:.|||.
 Frog   261 HMDQLSVGDRLSLCKDGCEAIVDTGTSLITGPVEEVTALQRAIGAIPLICGEYMILCDSIPSLPV 325

  Fly   321 VNLNIGGTVFTLAPRDYIVKVTQNGQTYCMSAFTYMEGLS-------FWILGDVFIGKFYTVFDK 378
            ::...||..::|....|::|:::.|:|.|:|.|.   ||.       .||:||||||::|||||:
 Frog   326 ISFTFGGRAYSLTGEQYVLKISKAGRTVCLSGFL---GLDIPPPAGPLWIIGDVFIGQYYTVFDR 387

  Fly   379 GNERIGFAR 387
            .|:|:|||:
 Frog   388 ANDRVGFAK 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:472175 151/325 (46%)
ctsdNP_988964.1 A1_Propeptide 24..>39 CDD:462326 5/17 (29%)
pepsin_retropepsin_like 72..396 CDD:472175 152/326 (47%)

Return to query results.
Submit another query.