DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17134 and napsa

DIOPT Version :10

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_956325.1 Gene:napsa / 336746 ZFINID:ZDB-GENE-030131-8690 Length:412 Species:Danio rerio


Alignment Length:406 Identity:171/406 - (42%)
Similarity:248/406 - (61%) Gaps:25/406 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLVLLVLVGIGHSAA-------KLNRVQLQVNKNFTKTHGSVKAEKTVLASKYS---FLAETSFS 58
            |...|:.:.|..|.|       |:..|:..:..| .||...:|: ...:.:|||   |..:.|.:
Zfish     6 LFAFLIGLLIADSQAIIRIPLHKMRTVRRMLADN-GKTIDEIKS-LAKMKAKYSDGTFTNQGSVT 68

  Fly    59 VSSSGAT------ENLHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTACQRH 117
            :.:...|      |.|.|.|:.:|||:|:||||.|.|::||||||:||||||..|...:.||..|
Zfish    69 IPAPTTTQLPPPVEKLTNFMDAQYYGMISIGTPPQDFSVLFDTGSSNLWVPSIHCAFLDIACWLH 133

  Fly   118 NKYDSSASSTYVANGEEFAIEYGTGSLSGFLSNDIVTIAGISIQNQTFGEALSEPGTTFVDAPFA 182
            .:|:|..|||||.||.||:|:||.||||||:|.|.|.:||:::..|.|.||:.:||..|..|.|.
Zfish   134 RRYNSKKSSTYVQNGTEFSIQYGRGSLSGFISQDTVNLAGLNVTGQQFAEAVKQPGIVFAVARFD 198

  Fly   183 GILGLAFSAIAVDGVTPPFDNMISQGLLDEPVISFYLKRQGTAVRGGELILGGIDSSLYRGSLTY 247
            |:||:|:.||:||.|||.||..::..:|.:.:.|||:.|......||||:|||.|...:.|.|.|
Zfish   199 GVLGMAYPAISVDRVTPVFDTAMAAKILPQNIFSFYINRDPAGDVGGELMLGGFDQQYFNGDLHY 263

  Fly   248 VPVSVPAYWQFKVNTIKTNGTL-LC-NGCQAIADTGTSLIAVPLAAYRKINRQLGATD-NDGEAF 309
            |.|:..||||.|::.::...|| || :|||||.|||||:|..|:...|.:.:.:||.. ..||.:
Zfish   264 VNVTRKAYWQIKMDEVQVGSTLTLCKSGCQAIVDTGTSMITGPVQEVRALQKAIGAIPLLMGEYW 328

  Fly   310 VRCGRVSSLPKVNLNIGGTVFTLAPRDYIVKVTQNGQTYCMSAFTYME----GLSFWILGDVFIG 370
            :.|.::.:||.|:.::||.:|.|..::|::|::..|...|:|.|..|:    ....|||||||||
Zfish   329 IDCKKIPTLPVVSFSLGGKMFNLTGQEYVMKMSHMGMNVCLSGFMAMDIPPPAGPLWILGDVFIG 393

  Fly   371 KFYTVFDKGNERIGFA 386
            ::|||||:..:|:|||
Zfish   394 RYYTVFDRDQDRVGFA 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:472175 150/322 (47%)
napsaNP_956325.1 A1_Propeptide 23..>41 CDD:462326 3/18 (17%)
Cathepsin_D2 86..410 CDD:133157 152/324 (47%)

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