DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17134 and Pgcl

DIOPT Version :10

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster


Alignment Length:384 Identity:183/384 - (47%)
Similarity:245/384 - (63%) Gaps:21/384 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLVLVGIGHSAAKLNRVQLQVNKNFTKTHGSVKAEKTVLASKYSFLAETSFSVSSSG-ATENLHN 70
            |:||||..:|.  |.|:.:|.:.||.::|.::.||:..:..||      :...:::| ..|:|.|
  Fly    15 LIVLVGEANST--LRRIPIQKSPNFKRSHKNIVAERDFVQQKY------NRQYTANGYPMEHLSN 71

  Fly    71 SMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTACQRHNKYDSSASSTYVANGEEF 135
            ..|.:|||.|:||||.|.|.:.|||||:|||||.:||  .:||||.|..:..:.||||||||..|
  Fly    72 YDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSC--ISTACQDHQVFYKNKSSTYVANGTAF 134

  Fly   136 AIEYGTGSLSGFLSNDIVTIAGISIQNQTFGEALSEPGTTFVDAPFAGILGLAFSAIAVDGVTPP 200
            :|.|||||:||:||.|.|..||::||:|||||..:|.||.||||.|.||||:.|.::|||||||.
  Fly   135 SITYGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAVDGVTPT 199

  Fly   201 FDNMISQGLLDEPVISFYLKRQGTAV-RGGELILGGIDSSLYRGSLTYVPVSVPAYWQFKVNTIK 264
            |.||:.|||:..||.||:|:..|:.. .||||||||.|.|||.||||||.|...|||:|:.:.||
  Fly   200 FQNMMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSLTYVNVVQAAYWKFQTDYIK 264

  Fly   265 TNGTLLCNGCQAIADTGTSLIAVPLAAYRKINRQLGATDNDGEAFVRCGRVSSLPKVNLNIGGTV 329
            ...|.:....|||||||||||..|.|.|.:|::...|   :.|....|.. :|.|.:.:||.|..
  Fly   265 VGSTSISTFAQAIADTGTSLIIAPQAQYDQISQLFNA---NSEGLFECSS-TSYPDLIININGVD 325

  Fly   330 FTLAPRDYIVKVTQNGQTYCMSAFTYMEGLSFWILGDVFIGKFYTVFDKGNERIGFARV 388
            |.:..:.||::    .:.:|..|...: ...|||:||||:|:.||.||.||:|:|||.|
  Fly   326 FKIPAKYYIIE----EEDFCSLAIQSI-NQDFWIMGDVFLGRIYTEFDVGNQRLGFAPV 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:472175 161/316 (51%)
PgclNP_525030.1 Asp 76..379 CDD:394983 161/313 (51%)

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