DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17134 and Ctse

DIOPT Version :10

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001388196.1 Gene:Ctse / 25424 RGDID:2446 Length:398 Species:Rattus norvegicus


Alignment Length:400 Identity:166/400 - (41%)
Similarity:237/400 - (59%) Gaps:29/400 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLVLLVLVGIGHSAAKLNRVQLQVNKNFTKTHGSVKAEKTVLASKYSF-----LAETSFSVS--- 60
            ||:||:|:.:..:...|:||.|       :.|.|::.:.........|     |....||.|   
  Rat     7 LLLLLLLLDLAQAQGVLHRVPL-------RRHQSLRKKLRAQGQLSDFWRSHNLDMIEFSESCNV 64

  Fly    61 SSGATENLHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTACQRHNKYDSSAS 125
            ..|..|.|.|.::.||:|.::||:|.|.|.::|||||:||||||..|  ::.||:.|..:..|.|
  Rat    65 DKGINEPLINYLDMEYFGTVSIGSPSQNFTVIFDTGSSNLWVPSVYC--TSPACKAHPVFHPSQS 127

  Fly   126 STYVANGEEFAIEYGTGSLSGFLSNDIVTIAGISIQNQTFGEALSEPGTTFVDAPFAGILGLAFS 190
            |||:..|..|:|:||||||:|.:..|.|::.|::::.|.|||::.|||.|||:|.|.|||||.:.
  Rat   128 STYMEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVEGQQFGESVKEPGQTFVNAEFDGILGLGYP 192

  Fly   191 AIAVDGVTPPFDNMISQGLLDEPVISFYLKRQGTAVRGGELILGGIDSSLYRGSLTYVPVSVPAY 255
            ::||.||||.||||::|.|:..|:.|.||........|.||..||.|.|.:.|||.::||:...|
  Rat   193 SLAVGGVTPVFDNMMAQNLVALPMFSVYLSSDPQGGSGSELTFGGYDPSHFSGSLNWIPVTKQGY 257

  Fly   256 WQFKVNTIKTNGTLL-CN-GCQAIADTGTSLIAVPLAAYRKINRQLGATDNDGEAFVRCGRVSSL 318
            ||..::.|:...|:: |: |||||.|||||||..|....:::...:|||..|||..|.|..::.:
  Rat   258 WQIALDGIQVGDTVMFCSEGCQAIVDTGTSLITGPPKKIKQLQEAIGATPMDGEYAVDCATLNMM 322

  Fly   319 PKVNLNIGGTVFTLAPRDYIVKVTQNGQTYCMSAFTYMEGLS-------FWILGDVFIGKFYTVF 376
            |.|...|.|..:||:|..||:....:|..:|.|.|   :||.       .||||||||.|||:||
  Rat   323 PNVTFLINGVSYTLSPTAYILPDLVDGMQFCGSGF---QGLDIQPPAGPLWILGDVFIRKFYSVF 384

  Fly   377 DKGNERIGFA 386
            |:||.::|.|
  Rat   385 DRGNNQVGLA 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:472175 146/324 (45%)
CtseNP_001388196.1 A1_Propeptide 25..51 CDD:462326 6/32 (19%)
pepsin_retropepsin_like 80..395 CDD:472175 144/319 (45%)

Return to query results.
Submit another query.