DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17134 and Pgc

DIOPT Version :9

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_579818.1 Gene:Pgc / 24864 RGDID:3943 Length:392 Species:Rattus norvegicus


Alignment Length:413 Identity:154/413 - (37%)
Similarity:226/413 - (54%) Gaps:51/413 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRQLLVLLVLVGIGHSAAKLNRVQLQ-------------VNKNFTKTHGSVKAEKTVLASKYSFL 52
            |:.::|.|:.:.:  ..|.|.||.|:             |.|:|.|||      |.....||.|.
  Rat     1 MKWMVVALLCLPL--LEASLLRVPLRKMKSIRETMKEQGVLKDFLKTH------KYDPGQKYHFG 57

  Fly    53 AETSFSVSSSGATENLHNS---MNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTAC 114
            ....:||        |:..   |:..|:|.|:||||.|.|.:||||||:||||.|..|  .:.||
  Rat    58 NFGDYSV--------LYEPMAYMDASYFGEISIGTPPQNFLVLFDTGSSNLWVSSVYC--QSEAC 112

  Fly   115 QRHNKYDSSASSTYVANGEEFAIEYGTGSLSGFLSNDIVTIAGISIQNQTFGEALSEPGTTFVDA 179
            ..|.:::.|.||||...|:.|:::||||||:||...|.:|:..|.:.||.||.:.:||||.||.|
  Rat   113 TTHARFNPSKSSTYYTEGQTFSLQYGTGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYA 177

  Fly   180 PFAGILGLAFSAIAVDGVTPPFDNMISQGLLDEPVISFYL-KRQGTAVRGGELILGGIDSSLYRG 243
            .|.||:|||:..::..|.|.....|:.:|.|.:|:...|| .:||:  .||:::.||:|.:||.|
  Rat   178 QFDGIMGLAYPGLSSGGATTALQGMLGEGALSQPLFGVYLGSQQGS--NGGQIVFGGVDKNLYTG 240

  Fly   244 SLTYVPVSVPAYWQFKVNTI----KTNGTLLCNGCQAIADTGTSLIAVPLAAYRKINRQLGATDN 304
            .:|:|||:...|||..::..    :.:|.....|||.|.||||||:.:|.....::.:.:||.:.
  Rat   241 EITWVPVTQELYWQITIDDFLIGDQASGWCSSQGCQGIVDTGTSLLVMPAQYLSELLQTIGAQEG 305

  Fly   305 D-GEAFVRCGRVSSLPKVNLNIGGTVFTLAPRDYIVKVTQNGQTYCM-----SAFTYMEGLSFWI 363
            : ||.||.|..|||||.::..:.|..|.|:|..||::    ...:||     .:.|...|...||
  Rat   306 EYGEYFVSCDSVSSLPTLSFVLNGVQFPLSPSSYIIQ----EDNFCMVGLESISLTSESGQPLWI 366

  Fly   364 LGDVFIGKFYTVFDKGNERIGFA 386
            |||||:..:|.:||.||.::|.|
  Rat   367 LGDVFLRSYYAIFDMGNNKVGLA 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:299705 132/329 (40%)
Asp 75..388 CDD:278455 132/323 (41%)
PgcNP_579818.1 A1_Propeptide 18..46 CDD:400357 8/27 (30%)
pepsin_retropepsin_like 73..391 CDD:416259 132/325 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344960
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1456
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.760

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