DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17134 and asp-18

DIOPT Version :10

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_507653.2 Gene:asp-18 / 191310 WormBaseID:WBGene00013973 Length:392 Species:Caenorhabditis elegans


Alignment Length:407 Identity:139/407 - (34%)
Similarity:209/407 - (51%) Gaps:50/407 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLVLLVLVGIGHSAAKLNRVQLQVNKNFTKTHGSVKAEKTVLASKY-SFLAETSFSVSSSGATEN 67
            ||:|||..    .:|.:.:|.       |.|.||.:| |.:...|| ||||.....:::  .::.
 Worm     3 LLLLLVTT----CSAAVFQVP-------TTTSGSFRA-KLIREGKYSSFLASRLQQLNT--GSQP 53

  Fly    68 LHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTACQ-------RHNKYDSSAS 125
            |....::...|.|.||:|.|...:..||.||||||..::|.:.|  |.       :| |::::.|
 Worm    54 LLGFSDDPCIGNITIGSPPQSAFVFMDTTSANLWVMGSACTSVN--CNDPLLGIIKH-KFNTTKS 115

  Fly   126 STYVANGEEFAIEYGTGSLSGFLSNDIVTIAGISIQNQTFGEALSEPGTTFVD-----APFAGIL 185
            :::|.:..:|.|:||:|..||:|..|.|.|.|:.||.|.||.|      ..||     .|..||.
 Worm   116 TSFVKSNRKFNIQYGSGECSGYLGTDTVEIGGLKIQKQEFGVA------NIVDYDFGTRPIDGIF 174

  Fly   186 GLAFSAIAVDGVTPPFDNMISQGLLDEPVISFYLKRQGTAV---RGGELILGGIDSSLYRGSLTY 247
            |||:.|::||.||||..|::||..||.|:.:.:..::....   ..|.:..||:|:.....:::|
 Worm   175 GLAWPALSVDQVTPPMQNLVSQNQLDAPIFTIFFDKRDPDYYYPSNGLITYGGLDTKNCNANISY 239

  Fly   248 VPVSVPAYWQFKVNTIKT---NGTLLCNGCQAIADTGTSLIAVPLAAYRKINRQLGAT-DNDGEA 308
            ||||...||||||:..:.   |.|:  |..|||.|||:|...:|.:....|..|..|| |.....
 Worm   240 VPVSSKTYWQFKVDGFQVGTYNRTV--NRDQAIMDTGSSWFGLPYSVIAGIATQTNATWDLYASV 302

  Fly   309 F-VRCGRVSSLPKVNLNIGGTVFTLAPRDYIVKVTQNGQTYCMSAFTYMEGLSFW---ILGDVFI 369
            : |.|..::|||.:...||...|.::..:|:..|..:..| |..|...::...|.   .||::||
 Worm   303 YTVPCSTMNSLPDLVFTIGAEKFPISAPEYVEDVGLDDGT-CALAMYGIDASGFGPSVTLGNIFI 366

  Fly   370 GKFYTVFDKGNERIGFA 386
            .::.:|||.||.|||||
 Worm   367 RRYCSVFDVGNARIGFA 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:472175 117/338 (35%)
asp-18NP_507653.2 pepsin_like 63..383 CDD:133138 117/331 (35%)

Return to query results.
Submit another query.