DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17134 and hrg-7

DIOPT Version :9

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001256448.1 Gene:hrg-7 / 182635 WormBaseID:WBGene00007605 Length:428 Species:Caenorhabditis elegans


Alignment Length:441 Identity:121/441 - (27%)
Similarity:203/441 - (46%) Gaps:67/441 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRQLLVLLVLVGIGHSAAKLNRVQLQVNKNFTKTHGS----VKAEKTVLASKYSFLAETSFSVSS 61
            |:..:.||.|:.:  .:|::::..:....|..:...:    .:.||    .:...|::.|..::|
 Worm     1 MKTFIALLALLTV--VSAEVHQFNIGYRPNMRQRMNAKGKLAEYEK----ERNELLSKKSLQLAS 59

  Fly    62 SGATENLHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCP------------------ 108
            |.:....:..|  .|...|::|:|.|.|.:..|:||:|||||..:|.                  
 Worm    60 SSSPVIDYEDM--AYMVQISLGSPAQNFVLFIDSGSSNLWVPDITCAGGKDATCGSYCKSTPYDA 122

  Fly   109 --------------------ASNTACQRHNKYDSSASSTYVANGEEFAIEYGTGSLSGFLSNDIV 153
                                ::..|||..::::||.||:||.||::|.:.|.||.:.||...|..
 Worm   123 CLTFCQEECCTKTVEGVKVLSTTDACQSKHRFNSSLSSSYVTNGQKFDMTYNTGEVKGFFGVDTF 187

  Fly   154 TIAGISI--QNQTFGEALSEPGTTFVDAPFAGILGLAFSAIAVDGVTPPFDNMISQGLLDEPVIS 216
            .....|:  ..|.||:| :..|..|...|..||:||.:.|:||:..|||..|:::||.||:|...
 Worm   188 CFTNTSVCATGQVFGQA-TTIGEAFAKQPEDGIIGLGWPALAVNQQTPPLFNLMNQGKLDQPYFV 251

  Fly   217 FYLKRQG--TAVRGGELILGGIDSSLYRGSLTYVPVSVPAYWQFKVNTIKTNGTLLC--NGCQAI 277
            .||...|  :.:.||...:||:|::....::.:||:|...:||||:..:.:......  :|.||.
 Worm   252 VYLANIGPTSQINGGAFTVGGLDTTHCSSNVDWVPLSTQTFWQFKLGGVSSGSYSQAPNSGWQAA 316

  Fly   278 ADTGTSLIAVPLAAYRKINRQLGAT--DNDGEAFVRCGRVSSLPKVNLNIGGTVFTLAPRDYIVK 340
            |||..|.|..|.:....:.:.:|||  ...|..|:.|..|  :|.:...|.|..:.:....::|.
 Worm   317 ADTAASFIGAPKSVVTSLAKAVGATYVPLTGAFFMDCDAV--VPDIVFTINGKTYNMPSTSFVVS 379

  Fly   341 VTQNGQTYCMSAFTYMEGLSF---WILGDVFIGKFYTVFDKGNERIGFARV 388
            .   |...||.||..:....|   |:||..|:..:..|.|..:.|:|.|:|
 Worm   380 A---GPGPCMFAFYELTAGGFYPAWMLGPPFMRAYCHVHDMKSGRLGLAKV 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:299705 107/364 (29%)
Asp 75..388 CDD:278455 107/361 (30%)
hrg-7NP_001256448.1 pepsin_retropepsin_like 71..427 CDD:416259 107/361 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D270366at33208
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.030

Return to query results.
Submit another query.