DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17134 and pgc.3

DIOPT Version :10

Sequence 1:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster
Sequence 2:XP_002933028.1 Gene:pgc.3 / 100489782 XenbaseID:XB-GENE-29079883 Length:383 Species:Xenopus tropicalis


Alignment Length:411 Identity:155/411 - (37%)
Similarity:228/411 - (55%) Gaps:50/411 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRQLLVLLVLVGIGHSAAKL----------NRVQLQVNKNFTKTHGSVKAEKTVLASKYSFLAET 55
            |:.|:::||.:.:.....::          |..:..|...:.:||      |..|:|:|     .
 Frog     1 MKFLILILVCLQLSEGLVRVPLMKSKSIRQNMAEAGVLDKYLQTH------KIDLSSRY-----R 54

  Fly    56 SFSVSSSGATENLHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTACQRHNKY 120
            .::|    .||:::  .:..|||.|:||||.|.|.:||||||:||||||:.|.:|  ||..||.:
 Frog    55 GYAV----VTESMY--FDTYYYGPISIGTPPQNFLVLFDTGSSNLWVPSSYCQSS--ACTNHNVF 111

  Fly   121 DSSASSTYVANGEEFAIEYGTG----SLSGFLSNDIVTIAGISIQNQTFGEALSEPGTTFVDAPF 181
            ..|.||||.:||::|.:.||.|    |::|....|.|:|.||||.||.||..::||.:.|..:||
 Frog   112 KPSQSSTYSSNGQKFTMGYGGGNVASSVTGLFGYDTVSIQGISITNQEFGLTITEPTSNFYYSPF 176

  Fly   182 AGILGLAFSAIAVDGVTPPFDNMISQGLLDEPVISFYLKRQGTAVRGGELILGGIDSSLYRGSLT 246
            .||||||:..::|:|.......|:.:.||:..:.|.||..|     .||:|.||:||:||.|.:.
 Frog   177 DGILGLAYPGLSVEGAQTVLQGMMQENLLNPSMFSIYLGSQ-----SGEIIFGGVDSNLYTGQIY 236

  Fly   247 YVPVSVPAYWQFKVNTIKTNG--TLLCN-GCQAIADTGTSLIAVPLAAYRKINRQLGATDNDGEA 308
            :.|:|...|||..:.....||  |..|: |||||.||||:.:.:|.....|:...||....:|..
 Frog   237 WAPLSQELYWQVALQEFSINGQATGWCSQGCQAIVDTGTTQLNIPQTYLTKLLPYLGIQTQNGGY 301

  Fly   309 FVRCGRVSSLPKVNLNIGGTVFTLAPRDYIVKVTQNGQTYCMSAFTYM-----EGLSFWILGDVF 368
            :|.|..:.:||.::..|.|..|.|.|..||::  :||  ||.:.|..:     .|...|||||||
 Frog   302 YVNCNNLQNLPTLSFTINGVSFPLPPSAYIIQ--ENG--YCYANFLNLSLPAQNGQPLWILGDVF 362

  Fly   369 IGKFYTVFDKGNERIGFARVA 389
            :.::|:|||.||.:||||.:|
 Frog   363 LRQYYSVFDYGNNQIGFASLA 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:472175 137/327 (42%)
pgc.3XP_002933028.1 A1_Propeptide 19..45 CDD:462326 2/25 (8%)
pepsin_retropepsin_like 66..381 CDD:472175 138/325 (42%)

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