DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6508 and APA1

DIOPT Version :9

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_001322792.1 Gene:APA1 / 837740 AraportID:AT1G11910 Length:517 Species:Arabidopsis thaliana


Alignment Length:468 Identity:162/468 - (34%)
Similarity:224/468 - (47%) Gaps:119/468 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NQNKTHANV--KAEKILLAAKYFLVDRQSSQTTQVLANGFNLEYTIRLCIGTPPQCFNLQFDTGS 95
            ::|:..|.|  |.||.|.|  |.|.|...:... ||.|..:.:|...:.||||||.|.:.|||||
plant    53 SKNRLAARVESKQEKPLRA--YRLGDSGDADVV-VLKNYLDAQYYGEIAIGTPPQKFTVVFDTGS 114

  Fly    96 SDLWVPSVKCSSTNEACQKHNKYNSSASSSHVEDGKGFSIQYGSGSLSGFLSTDTVDIDGMVIRN 160
            |:|||||.|| ..:.||..|.||.||.||::.::||..:|.||:|:::||.|.|.|.:..:|:::
plant   115 SNLWVPSSKC-YFSLACLLHPKYKSSRSSTYEKNGKAAAIHYGTGAIAGFFSNDAVTVGDLVVKD 178

  Fly   161 QTFAEAIDEPGSAFVNTIFDGIIGMAFASISGGVTTP-FDNIIRQGLVKHPVFSVYLRRDGTSQS 224
            |.|.||..|||..||...||||:|:.|..||.|...| :.|:::|||:|.||||.:|.|:...:.
plant   179 QEFIEATKEPGITFVVAKFDGILGLGFQEISVGKAAPVWYNMLKQGLIKEPVFSFWLNRNADEEE 243

  Fly   225 GGEVIWGGIDRSIYRGCINYVPVSMPAYWQFTANSVKIEGIL--LC-NGCQAIADTGTSLIAVPL 286
            |||:::||:|.:.::|...||||:...||||....|.|.|..  .| :||.||||:||||:|.|.
plant   244 GGELVFGGVDPNHFKGKHTYVPVTQKGYWQFDMGDVLIGGAPTGFCESGCSAIADSGTSLLAGPT 308

  Fly   287 RAYKAINKVLNA----------------------------------------------------- 298
            .....||..:.|                                                     
plant   309 TIITMINHAIGAAGVVSQQCKTVVDQYGQTILDLLLSETQPKKICSQIGLCTFDGTRGVSMGIES 373

  Fly   299 ----------TDAGD-----------------------------------------GEAFVDCSS 312
                      ...||                                         ||:.|||:.
plant   374 VVDKENAKLSNGVGDAACSACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSPMGESAVDCAQ 438

  Fly   313 LCRLPNVNLNIGGTTYTLTPKDYIYKVQADNNQTLCLSGFTYLQ----GNLLWILGDIFLGKVYT 373
            |..:|.|:|.|||..:.|.|::|:.|| .:.....|:|||..|.    ...||||||:|:||.:|
plant   439 LSTMPTVSLTIGGKVFDLAPEEYVLKV-GEGPVAQCISGFIALDVAPPRGPLWILGDVFMGKYHT 502

  Fly   374 VFDVGKERIGFAK 386
            |||.|.|::|||:
plant   503 VFDFGNEQVGFAE 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:299705 148/429 (34%)
Asp 73..387 CDD:278455 148/426 (35%)
APA1NP_001322792.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 1 1.000 - - mtm978
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.890

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