DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6508 and AT4G04460

DIOPT Version :10

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_192355.1 Gene:AT4G04460 / 825776 AraportID:AT4G04460 Length:508 Species:Arabidopsis thaliana


Alignment Length:461 Identity:152/461 - (32%)
Similarity:219/461 - (47%) Gaps:124/461 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LAAKYFLVDRQSSQTTQ-------------VLANGFNLEYTIRLCIGTPPQCFNLQFDTGSSDLW 99
            ||::.||.:|.|..:.:             .|.|..:.:|...:.||||||.|.:.||||||:||
plant    48 LASQLFLKNRGSHWSPKHYFRLNDENADMVPLKNYLDAQYYGDITIGTPPQKFTVIFDTGSSNLW 112

  Fly   100 VPSVKCSSTNEACQKHNKYNSSASSSHVEDGKGFSIQYGSGSLSGFLSTDTVDIDGMVIRNQTFA 164
            :||.|| ..:.||..|:||.:|.|||:.::||..||:||:|::||:.|.|.|.:..:|::.|.|.
plant   113 IPSTKC-YLSVACYFHSKYKASQSSSYRKNGKPASIRYGTGAISGYFSNDDVKVGDIVVKEQEFI 176

  Fly   165 EAIDEPGSAFVNTIFDGIIGMAFASISGGVTTP-FDNIIRQGLVKHPVFSVYLRRDGTSQSGGEV 228
            ||..|||..|:...||||:|:.|..||.|.:|| :.|::.:||||.|:||.:|.|:.....|||:
plant   177 EATSEPGITFLLAKFDGILGLGFKEISVGNSTPVWYNMVEKGLVKEPIFSFWLNRNPKDPEGGEI 241

  Fly   229 IWGGIDRSIYRGCINYVPVSMPAYWQFTANSVKIEGI---LLCNGCQAIADTGTSLIAVPLRAYK 290
            ::||:|...::|...:|||:...||||....::|.|.   ....||.||||:||||:..|.....
plant   242 VFGGVDPKHFKGEHTFVPVTHKGYWQFDMGDLQIAGKPTGYCAKGCSAIADSGTSLLTGPSTVIT 306

  Fly   291 AINKVLNATD-------------------------------------AGDG-------------- 304
            .||..:.|..                                     |.||              
plant   307 MINHAIGAQGIVSRECKAVVDQYGKTMLNSLLAQEDPKKVCSQIGVCAYDGTQSVSMGIQSVVDD 371

  Fly   305 --------------------------------------------------EAFVDCSSLCRLPNV 319
                                                              ::.|||..:..:|.|
plant   372 GTSGLLNQAMCSACEMAAVWMESELTQNQTQERILAYAAELCDHIPTQNQQSAVDCGRVSSMPIV 436

  Fly   320 NLNIGGTTYTLTPKDYIYKVQADNNQTLCLSGFTYLQ----GNLLWILGDIFLGKVYTVFDVGKE 380
            ..:|||.::.|||:|||:|: .:..::.|.||||.:.    ...||||||||:|..:||||.||.
plant   437 TFSIGGRSFDLTPQDYIFKI-GEGVESQCTSGFTAMDIAPPRGPLWILGDIFMGPYHTVFDYGKG 500

  Fly   381 RIGFAK 386
            |:||||
plant   501 RVGFAK 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:472175 143/426 (34%)
AT4G04460NP_192355.1 phytepsin 77..506 CDD:133162 144/430 (33%)
SapB_2 321..353 CDD:460945 0/31 (0%)
SapB_1 380..417 CDD:461575 0/36 (0%)

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