DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6508 and AT3G51330

DIOPT Version :10

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_566948.1 Gene:AT3G51330 / 824296 AraportID:AT3G51330 Length:529 Species:Arabidopsis thaliana


Alignment Length:375 Identity:92/375 - (24%)
Similarity:138/375 - (36%) Gaps:68/375 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 QSSQTTQVLANGFNLEYTIRLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQKH------- 115
            :.::|..:...|| |.|. .:.:|||...|.:..||||...|:| ..|.||   |.:.       
plant    88 RGNRTISIDLLGF-LHYA-NVSVGTPATWFLVALDTGSDLFWLP-CNCGST---CIRDLKEVGLS 146

  Fly   116 -----NKY--NSSASSSHV--EDGKGFSIQYGSGSLSG------FLSTDTVDIDGM---VIRNQT 162
                 |.|  |:|::||.:  .|.:.|.....|...|.      :||.||.....:   |:...|
plant   147 QSRPLNLYSPNTSSTSSSIRCSDDRCFGSSRCSSPASSCPYQIQYLSKDTFTTGTLFEDVLHLVT 211

  Fly   163 FAEAIDEPGSAFVNTIFDGIIGMAFASISGGVTTPFDNIIRQGLVKHPVFSVYLRRDGTSQSGGE 227
            ..|.: ||..|.: |:..|.....|...|..|    :.::..||..:.|.|:..:...|:.| ..
plant   212 EDEGL-EPVKANI-TLGCGKNQTGFLQSSAAV----NGLLGLGLKDYSVPSILAKAKITANS-FS 269

  Fly   228 VIWGGIDRSIYR---GCINY--------VPVSMPAYWQFTANSVKIEGILLCNGCQAIA--DTGT 279
            :.:|.|...:.|   |...|        :|......:..:...|.:.|..:  |.|.:|  ||||
plant   270 MCFGNIIDVVGRISFGDKGYTDQMETPLLPTEPSPTYAVSVTEVSVGGDAV--GVQLLALFDTGT 332

  Fly   280 SLIAVPLRAYKAINKVL--NATDAG---DGE-AFVDCSSL------CRLPNVNLNIGGTTYTLTP 332
            |...:....|..|.|..  :.||..   |.| .|..|..|      ...|.|.:...|.:.....
plant   333 SFTHLLEPEYGLITKAFDDHVTDKRRPIDPELPFEFCYDLSPNKTTILFPRVAMTFEGGSQMFLR 397

  Fly   333 KDYIYKVQADNNQTLCLSGFTYLQGNLLWILGDIFLGKVYTVFDVGKERI 382
            .........||:...|| |........:.|:|..|:.....|||  :||:
plant   398 NPLFIVWNEDNSAMYCL-GILKSVDFKINIIGQNFMSGYRIVFD--RERM 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:472175 91/365 (25%)
AT3G51330NP_566948.1 pepsin_retropepsin_like 102..453 CDD:472175 88/360 (24%)

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