DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6508 and ctsd

DIOPT Version :9

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_571785.2 Gene:ctsd / 65225 ZFINID:ZDB-GENE-010131-8 Length:398 Species:Danio rerio


Alignment Length:401 Identity:167/401 - (41%)
Similarity:233/401 - (58%) Gaps:18/401 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEVGQLIIIPLFLLLLDHSMGQLRRTPIT--RQINQNKTHANVKAEKILLAA---KYFL-VDRQS 59
            |.:..|:::..|....|    .:.|.|:.  |.:.:..:.:....|:::.::   ||.| ....:
Zfish     1 MRIAFLLLVVAFFCTSD----AIVRIPLKKFRTLRRTLSDSGRSLEELVSSSNSLKYNLGFPASN 61

  Fly    60 SQTTQVLANGFNLEYTIRLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQKHNKYNSSASS 124
            ..|.:.|.|..:.:|...:.:|||.|.|.:.||||||:||||||.||.|:.||..|:|||...||
Zfish    62 DPTPETLKNYLDAQYYGEIGLGTPVQTFTVVFDTGSSNLWVPSVHCSLTDIACLLHHKYNGGKSS 126

  Fly   125 SHVEDGKGFSIQYGSGSLSGFLSTDTVDIDGMVIRNQTFAEAIDEPGSAFVNTIFDGIIGMAFAS 189
            ::|::|..|:||||||||||:||.||..|..:.:..|.|.|||.:||.||:...||||:|||:..
Zfish   127 TYVKNGTQFAIQYGSGSLSGYLSQDTCTIGDIAVEKQIFGEAIKQPGVAFIAAKFDGILGMAYPR 191

  Fly   190 IS-GGVTTPFDNIIRQGLVKHPVFSVYLRRDGTSQSGGEVIWGGIDRSIYRGCINYVPVSMPAYW 253
            |: .||...||.::.|..|:..|||.||.|:..:|.|||::.||.|...|.|..|||.:|..|||
Zfish   192 IAVDGVPPVFDMMMSQKKVEKNVFSFYLNRNPDTQPGGELLLGGTDPKYYTGDFNYVDISRQAYW 256

  Fly   254 QFTANSVKI-EGILLC-NGCQAIADTGTSLIAVPLRAYKAINKVLNATDAGDGEAFVDCSSLCRL 316
            |...:.:.| .|:.|| .||:||.|||||||..|....||:.|.:.|.....||..|||..:..|
Zfish   257 QIHMDGMSIGSGLSLCKGGCEAIVDTGTSLITGPAAEVKALQKAIGAIPLMQGEYMVDCKKVPTL 321

  Fly   317 PNVNLNIGGTTYTLTPKDYIYKVQADNNQTLCLSGFTYLQ----GNLLWILGDIFLGKVYTVFDV 377
            |.::.::||..|:||.:.||.| ::.....:|||||..|.    ...||||||:|:|:.|||||.
Zfish   322 PTISFSLGGKVYSLTGEQYILK-ESQGGHDICLSGFMGLDIPPPAGPLWILGDVFIGQYYTVFDR 385

  Fly   378 GKERIGFAKLK 388
            ...|:||||.|
Zfish   386 ENNRVGFAKAK 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:299705 151/324 (47%)
Asp 73..387 CDD:278455 151/320 (47%)
ctsdNP_571785.2 A1_Propeptide 19..44 CDD:285240 4/24 (17%)
Cathepsin_D2 70..394 CDD:133157 151/324 (47%)
Asp 75..395 CDD:278455 151/320 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.890

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