DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6508 and PGC

DIOPT Version :10

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_002621.1 Gene:PGC / 5225 HGNCID:8890 Length:388 Species:Homo sapiens


Alignment Length:405 Identity:154/405 - (38%)
Similarity:226/405 - (55%) Gaps:48/405 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LIIIPLFLLLLDHSMGQLRRTPITRQINQNKTHANVKAEKILL-----------AAKYFLVDRQS 59
            ::::.:.|.||:.::       :...:.:.|:......||.||           |.||...|  .
Human     4 MVVVLVCLQLLEAAV-------VKVPLKKFKSIRETMKEKGLLGEFLRTHKYDPAWKYRFGD--L 59

  Fly    60 SQTTQVLANGFNLEYTIRLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQKHNKYNSSASS 124
            |.|.:.:|. .:..|...:.||||||.|.:.||||||:||||||.|.|  :||..|:::|.|.||
Human    60 SVTYEPMAY-MDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQS--QACTSHSRFNPSESS 121

  Fly   125 SHVEDGKGFSIQYGSGSLSGFLSTDTVDIDGMVIRNQTFAEAIDEPGSAFVNTIFDGIIGMAFAS 189
            ::..:|:.||:|||||||:||...||:.:..:.:.||.|..:.:|||:.||...||||:|:|:.:
Human   122 TYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPA 186

  Fly   190 IS-GGVTTPFDNIIRQGLVKHPVFSVYLRRDGTSQSGGEVIWGGIDRSIYRGCINYVPVSMPAYW 253
            :| ...||....::::|.:..|||||||.....| |||.|::||:|.|:|.|.|.:.||:...||
Human   187 LSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGS-SGGAVVFGGVDSSLYTGQIYWAPVTQELYW 250

  Fly   254 QFTANSVKIEGILL-------CN-GCQAIADTGTSLIAVPLRAYKAINKVLNATDAGDGEAFVDC 310
            |     :.||..|:       |: |||||.||||||:.||.:...|:.:...|.:...|:..|:|
Human   251 Q-----IGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQEDEYGQFLVNC 310

  Fly   311 SSLCRLPNVNLNIGGTTYTLTPKDYIYKVQADNNQTLCLSGF--TYL---QGNLLWILGDIFLGK 370
            :|:..||::...|.|..:.|.|..||.     :|...|..|.  |||   .|..||||||:||..
Human   311 NSIQNLPSLTFIINGVEFPLPPSSYIL-----SNNGYCTVGVEPTYLSSQNGQPLWILGDVFLRS 370

  Fly   371 VYTVFDVGKERIGFA 385
            .|:|:|:|..|:|||
Human   371 YYSVYDLGNNRVGFA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:472175 139/332 (42%)
PGCNP_002621.1 A1_Propeptide 20..46 CDD:462326 5/25 (20%)
gastricsin 70..387 CDD:133144 139/329 (42%)

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