DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6508 and bace2

DIOPT Version :9

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:XP_009289748.1 Gene:bace2 / 449818 ZFINID:ZDB-GENE-041010-68 Length:503 Species:Danio rerio


Alignment Length:420 Identity:106/420 - (25%)
Similarity:179/420 - (42%) Gaps:86/420 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KTHANVKAEKILLAAKY---FLVDRQSSQTTQVLA-NGFNLE----------------------- 73
            |:|:..|....:.|.|:   ..:|.:..|..:..| :|.:|.                       
Zfish    15 KSHSVFKIPLNIFAGKFNASVQLDLRPLQKNEAAAKSGLSLASDPAGIVNFLDMINNLKGDSGRG 79

  Fly    74 YTIRLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQKH----NKYNSSASSSHVEDGKGFS 134
            |.:::.||||.|..|:..|||||:..|          |...|    :.:|.:.||::....:..:
Zfish    80 YYMQMIIGTPGQTLNILVDTGSSNFAV----------AAAAHPYITHYFNRALSSTYQSTERAVA 134

  Fly   135 IQYGSGSLSGFLSTDTVDI----DGMVIRNQTFAEAIDEPGSAFVNTIFDGIIGMAF---ASISG 192
            ::|..|...|.|.||.:.|    .|.:..|  .|..:...|.......:.||:|:|:   |....
Zfish   135 VKYTQGEWEGELGTDLITIPEGPSGAITIN--IAAILTSEGFFLPGINWQGILGLAYPLLARPDP 197

  Fly   193 GVTTPFDNIIRQGLVKHPVFSVYLRRDGTSQS------GGEVIWGGIDRSIYRGCINYVPVSMPA 251
            .|...|::::||..:. .|||:.:...|...|      ||.:|.||::.:::||.|.|.||....
Zfish   198 SVEPFFNSVVRQTGIP-DVFSLQMCGAGVPASTTGDPAGGSLIMGGVEPTLHRGPIWYTPVLEEW 261

  Fly   252 YWQFTANSVKI--EGILL-C---NGCQAIADTGTSLIAVPLRAYKAINKVLNATDAGD--GEAFV 308
            |:|.....:::  :.:.| |   |..:||.|:||:|:.:|...:.|:...:..|...|  ...|.
Zfish   262 YYQVEVLKLEVGDQNLNLDCKEYNSDKAIVDSGTTLLRLPANVFTAVVDTIMQTSLIDDFSAGFF 326

  Fly   309 DCSSL-CRL---------PNVNLNIGGTT------YTLTPKDYIYKVQADNNQTL-CLS-GFTYL 355
            |.:.| |.:         |.|::.:.||.      .|:.|:.||..| .|.:.|| |.. |.:..
Zfish   327 DGTKLACWMRGESPWRFFPKVSIYLRGTNTSQSFRITILPQLYIQPV-TDIDGTLDCFRFGISPS 390

  Fly   356 QGNLLWILGDIFLGKVYTVFDVGKERIGFA 385
            ...|  ::|...:...|.:||..::|:|||
Zfish   391 ANGL--VIGATVMEGFYVIFDRAQKRVGFA 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:299705 98/384 (26%)
Asp 73..387 CDD:278455 96/379 (25%)
bace2XP_009289748.1 beta_secretase_like 77..439 CDD:133140 96/358 (27%)
Asp 80..418 CDD:278455 94/353 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585940
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.